RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TEX9Q8N6V9 391 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC2A14Q8TDB8 520 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 CLEC4CQ8WTT0 213 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 RSAD2Q8WXG1 361 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 APBB2Q92870 758 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 PEBP4Q96S96 227 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 MIS12Q9H081 205 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 CYLDQ9NQC7 956 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 SAE1Q9UBE0 346 aaPredicted RBP11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 HESX1Q9UBX0 185 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 PADI3Q9ULW8 664 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 L3MBTL1Q9Y468 752 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 IQANK1A0A1B0GTG1 560 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ARL5CA6NH57 179 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 C2CD4BA6NLJ0 364 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 PAPSS1O43252 624 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 HUS1O60921 280 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TGDSO95455 350 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 IL1BP01584 269 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ZSCAN5DPP0CG00 497 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 PDGFRAP16234 1089 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CALB2P22676 271 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ACAT1P24752 427 aaKnown RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 PTPN4P29074 926 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 STIP1P31948 543 aaKnown RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CLCNKBP51801 687 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ZNF143P52747 638 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 DYNLT1P63172 113 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 FBXO46Q6PJ61 603 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 LVRNQ6Q4G3 990 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 LIMS2Q7Z4I7 341 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 OSTM1Q86WC4 334 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 C3orf58Q8NDZ4 430 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 RXFP2Q8WXD0 754 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 HSPH1Q92598 858 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CYTH2Q99418 400 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 PAAF1Q9BRP4 392 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 SNX25Q9H3E2 840 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TLE6Q9H808 572 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 USP18Q9UMW8 372 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 DIAPH2O60879 1101 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 RNF8O76064 485 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 IFNB1P01574 187 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 RPSAP08865 295 aaKnown RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 KRT4P19013 534 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 GPD1P21695 349 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CST5P28325 142 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 HOXD10P28358 340 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 LRPAP1P30533 357 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 SCNN1GP51170 649 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ADCY1Q08828 1119 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 NAA25Q14CX7 972 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ARHGAP17Q68EM7 881 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 C3orf62Q6ZUJ4 267 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CYP4V2Q6ZWL3 525 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TMEM110Q86TL2 294 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 CRYBG2Q8N1P7 616 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 GLIS1Q8NBF1 620 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ABHD8Q96I13 439 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TMEM121Q9BTD3 319 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 RNPEPL1Q9HAU8 725 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
SH3RF1-203ENST00000508685 APOC4-APOC2K7ER74 178 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CYB561D2O14569 222 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 GPR182O15218 404 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 FAM155BO75949 473 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 APOC2P02655 101 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 THP07101 528 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ETS1P14921 441 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 KDELR1P24390 212 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 GPX6P59796 221 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 OTUD4Q01804 1114 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 BST2Q10589 180 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ITGA7Q13683 1181 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC1A5Q15758 541 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CCDC14Q49A88 953 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 WSCD1Q658N2 575 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 NLRP9Q7RTR0 991 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 OTOAQ7RTW8 1153 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 C4orf33Q8N1A6 199 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ANKRD52Q8NB46 1076 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 B3GALNT2Q8NCR0 500 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 CPT1BQ92523 772 aa11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
SH3RF1-203ENST00000508685 THOC1Q96FV9 657 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms