RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SYNPOQ8N3V7 929 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 CHFRQ96EP1 664 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 SERPINB11Q96P15 392 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 POPDC2Q9HBU9 364 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 RBM12Q9NTZ6 932 aaKnown RBP20.18■□□□□ 0.82
LMNA-221ENST00000506981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 GREM1O60565 184 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 GLI1P08151 1106 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 FERP16591 822 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 CHKAP35790 457 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 EIF2DP41214 584 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 UBASH3AP57075 661 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 YWHAZP63104 245 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 CDR2Q01850 454 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 ARID5AQ03989 594 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 FZD5Q13467 585 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 CCINQ13939 588 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 ANGPT1Q15389 498 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 TRIP4Q15650 581 aaPredicted RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 PREPLQ4J6C6 727 aaPredicted RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 PTPN20Q4JDL3 420 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 FSTL4Q6MZW2 842 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 TRIM72Q6ZMU5 477 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 FAM183BPQ6ZVS7 135 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 BEND5Q7L4P6 421 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 ERICH1Q86X53 443 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 DENND1CQ8IV53 801 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 C1orf210Q8IVY1 113 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 SLC20A1Q8WUM9 679 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 DDX1Q92499 740 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 NAP1L5Q96NT1 182 aaPredicted RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 BBS2Q9BXC9 721 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 ASNSD1Q9NWL6 643 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 TJP2Q9UDY2 1190 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 NOCTQ9UK39 431 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 MYO6Q9UM54 1294 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 FANCMQ8IYD8 2048 aa20.17■□□□□ 0.82
LMNA-221ENST00000506981 MYO18AQ92614 2054 aaKnown RBP20.17■□□□□ 0.82
LMNA-221ENST00000506981 HOXC11O43248 304 aaPredicted RBP20.16■□□□□ 0.82
LMNA-221ENST00000506981 HSF2BPO75031 334 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 ERBB2P04626 1255 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 TPM3P06753 285 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 OPRD1P41143 372 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 TBX4P57082 545 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 PPP2R5DQ14738 602 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 FBXO43Q4G163 708 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 NUGGCQ68CJ6 796 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 TPGS1Q6ZTW0 290 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 ZDHHC17Q8IUH5 632 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 CCDC26Q8TAB7 109 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 DQX1Q8TE96 717 aaKnown RBP20.16■□□□□ 0.82
LMNA-221ENST00000506981 C18orf8Q96DM3 657 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 XPO6Q96QU8 1125 aaKnown RBP20.16■□□□□ 0.82
LMNA-221ENST00000506981 SEPT11Q9NVA2 429 aaKnown RBP20.16■□□□□ 0.82
LMNA-221ENST00000506981 WDR35Q9P2L0 1181 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 NAALADL1Q9UQQ1 740 aa20.16■□□□□ 0.82
LMNA-221ENST00000506981 NEDD8-MDP1E9PL57 170 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 H0Y858 1186 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 EGFP01133 1207 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 KLKB1P03952 638 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 CYBBP04839 570 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 APODP05090 189 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 CCR3P51677 355 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 NOMO3P69849 1222 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 SLC6A3Q01959 620 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 TCF15Q12870 199 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 NNTQ13423 1086 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 NR1I3Q14994 352 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 GAB4Q2WGN9 574 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 NAA35Q5VZE5 725 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 NAIF1Q69YI7 327 aaPredicted RBP20.15■□□□□ 0.82
LMNA-221ENST00000506981 TMEM25Q86YD3 366 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 UNC45BQ8IWX7 931 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 PNKPQ96T60 521 aa20.15■□□□□ 0.82
LMNA-221ENST00000506981 AGO1Q9UL18 857 aaKnown RBP20.15■□□□□ 0.82
LMNA-221ENST00000506981 LATS1O95835 1130 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 FYNP06241 537 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 CDK17Q00537 523 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 FMO1Q01740 532 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 KDSRQ06136 332 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 RING1Q06587 406 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 MTAPQ13126 283 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 DCAF6Q58WW2 860 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 OLFML1Q6UWY5 402 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 NUDT18Q6ZVK8 323 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 SLC26A9Q7LBE3 791 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 CPXM2Q8N436 756 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 SPEM1Q8N4L4 309 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 NAT16Q8N8M0 369 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 CPA5Q8WXQ8 436 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 ATOH1Q92858 354 aaPredicted RBP20.14■□□□□ 0.81
LMNA-221ENST00000506981 PIWIL1Q96J94 861 aaKnown RBP20.14■□□□□ 0.81
LMNA-221ENST00000506981 FAM204AQ9H8W3 233 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 ARHGEF4Q9NR80 690 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 MARK1Q9P0L2 795 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 DEC1Q9P2X7 70 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 TLR6Q9Y2C9 796 aa20.14■□□□□ 0.81
LMNA-221ENST00000506981 ATG13O75143 517 aa20.13■□□□□ 0.81
LMNA-221ENST00000506981 RNF40O75150 1001 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms