RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DKK1O94907 266 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 RHOBTB3O94955 611 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 LATS1O95835 1130 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 RARGP13631 454 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CD59P13987 128 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC130P13994 396 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 RPL13P26373 211 aaKnown RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CD6P30203 668 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ME1P48163 572 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CASP4P49662 377 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 PGFP49763 221 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 VAMP7P51809 220 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 MFAP3P55082 362 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 MAP3K7CLP57077 242 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 DLG4P78352 724 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ZBTB16Q05516 673 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 KDSRQ06136 332 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 IFRD2Q12894 506 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 FOXC1Q12948 553 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 STARD3Q14849 445 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 EDRF1Q3B7T1 1238 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 KMT5BQ4FZB7 885 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 COBLL1Q53SF7 1204 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 EGFLAMQ63HQ2 1017 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ARHGAP17Q68EM7 881 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 KRT39Q6A163 491 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 SMYD5Q6GMV2 418 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 PM20D1Q6GTS8 502 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 KIAA0907Q7Z7F0 614 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 MIB1Q86YT6 1006 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 GUF1Q8N442 669 aaKnown RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 MINDY1Q8N5J2 469 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 FRMD1Q8N878 549 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 NAT16Q8N8M0 369 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ZNF557Q8N988 423 aaPredicted RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 C12orf29Q8N999 325 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC150Q8NCX0 1101 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 TTC16Q8NEE8 873 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 DEFB124Q8NES8 71 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 C1orf216Q8TAB5 229 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 WBP2Q969T9 261 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 PLD4Q96BZ4 506 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 PIWIL1Q96J94 861 aaKnown RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 NIF3L1Q9GZT8 377 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 BLZF1Q9H2G9 400 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 NMUR1Q9HB89 426 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEM8AQ9HCN3 771 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 OLA1Q9NTK5 396 aaKnown RBP6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 EXOC1Q9NV70 894 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 OSER1Q9NX31 292 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 GON4LQ3T8J9 2241 aa6.42□□□□□ -1.38
LSM3P4-201ENST00000502948 ADAMTS20P59510 1910 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 FRYQ5TBA9 3013 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 A0A1W2PQH9 124 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 METTL12A8MUP2 240 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 E9PAM4 449 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 NEDD8-MDP1E9PL57 170 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 CYP26A1O43174 497 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 STX10O60499 249 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 NDUFS2O75306 463 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TBX18O95935 607 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 HLA-DRAP01903 254 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 KLKB1P03952 638 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 CFIP05156 583 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 NR2F2P24468 414 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 PSMC2P35998 433 aaKnown RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 AFMP43652 599 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 MAPK8P45983 427 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 SLC8A3P57103 927 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 SIM1P81133 766 aaPredicted RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 CAMK2GQ13555 558 aaPredicted RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TRIP6Q15654 476 aaKnown RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 UAP1L1Q3KQV9 507 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 ZCWPW2Q504Y3 356 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 MPPE1Q53F39 396 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 MPP7Q5T2T1 576 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 KIAA1211LQ6NV74 962 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 GPRIN1Q7Z2K8 1008 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 ANKS1BQ7Z6G8 1248 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 SCD5Q86SK9 330 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 PROSER1Q86XN7 944 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TRIML1Q8N9V2 468 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 ANKRD52Q8NB46 1076 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 BAHD1Q8TBE0 780 aaPredicted RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 KCTD13Q8WZ19 329 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 CCDC47Q96A33 483 aaKnown RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 AZIN2Q96A70 460 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 HSPA12BQ96MM6 686 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TWNKQ96RR1 684 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 ACOX2Q99424 681 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 NUP58Q9BVL2 599 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 PRDM16Q9HAZ2 1276 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 HMGXB4Q9UGU5 601 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 SERTAD1Q9UHV2 236 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 KIAA1257Q9ULG3 409 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 SCML1Q9UN30 329 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 COQ4Q9Y3A0 265 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms