RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FAM71DQ8N9W8 422 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 CPEB3Q8NE35 698 aaKnown RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 TDRD7Q8NHU6 1098 aaKnown RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 ADAMTS18Q8TE60 1221 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 RNF125Q96EQ8 232 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 VPS50Q96JG6 964 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 FAR2Q96K12 515 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 DPCDQ9BVM2 203 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 NRDE2Q9H7Z3 1164 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 RMI1Q9H9A7 625 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 KCNK9Q9NPC2 374 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 SLC45A1Q9Y2W3 748 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 CYP46A1Q9Y6A2 500 aa5.92□□□□□ -1.46
HMGB1P3-201ENST00000502802 A6NCN8 305 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 OTOL1A6NHN0 477 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 PAX4O43316 350 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 HNRNPRO43390 633 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 TMEM63AO94886 807 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 NDUFA10O95299 355 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 MMP8P22894 467 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 DDX6P26196 483 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 BMPR1AP36894 532 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 NAP1L1P55209 391 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 NXPH1P58417 271 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 EIF2B5Q13144 721 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 TOB2Q14106 344 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 KRT32Q14532 448 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 TOMM20Q15388 145 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 GPR68Q15743 365 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 SLC45A4Q5BKX6 768 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 TEDDM1Q5T9Z0 273 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 SPATA1Q5VX52 437 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 NAA35Q5VZE5 725 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 ITPRIPL1Q6GPH6 555 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 KRBA2Q6ZNG9 492 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 FASTKD5Q7L8L6 764 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 MAVSQ7Z434 540 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 P3H2Q8IVL5 708 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 PDILTQ8N807 584 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 ANKRD44Q8N8A2 993 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 PTGR2Q8N8N7 351 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 LINS1Q8NG48 757 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 SLC2A12Q8TD20 617 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 LPIN2Q92539 896 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 STAMQ92783 540 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 FUBP1Q96AE4 644 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 R3HDM4Q96D70 268 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 RBM17Q96I25 401 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 PIGSQ96S52 555 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 ADOQ96SZ5 270 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 BARD1Q99728 777 aaKnown RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 AURKAIP1Q9NWT8 199 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 RAB21Q9UL25 225 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 HSF4Q9ULV5 492 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 PCDHA10Q9Y5I2 948 aa5.91□□□□□ -1.46
HMGB1P3-201ENST00000502802 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3DA0A087WVF3 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3IA0A087WXS9 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3EA0A087X179 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3KA0A087X1G2 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3BA6NDS4 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3FA6NER0 549 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 MBD3L5A6NJ08 208 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3LB9A6J9 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 M0QZQ0 153 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 SPTLC2O15270 562 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 NKX2-8O15522 239 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 USO1O60763 962 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 FAM20BO75063 409 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 PMPCBO75439 489 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 HEXIM1O94992 359 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 FESP07332 822 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3HP0C7X1 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 ALADP13716 330 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 CLNS1AP54105 237 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 FAM3BP58499 235 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 RPL15P61313 204 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 IRX6P78412 446 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 GALNT2Q10471 571 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 SF3B3Q15393 1217 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 LRRC24Q50LG9 513 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 CBWD5Q5RIA9 395 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TREML2Q5T2D2 321 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 HAUS3Q68CZ6 603 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3GQ6DHY5 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3CQ6IPX1 549 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 C1QL4Q86Z23 238 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TMPRSS6Q8IU80 811 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TBC1D3Q8IZP1 549 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 ADAMTS15Q8TE58 950 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 XAGE5Q8WWM1 108 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 NPIPB3Q92617 1050 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 CTHRC1Q96CG8 243 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 WDYHV1Q96HA8 205 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 PPP1R10Q96QC0 940 aaKnown RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 ADAM2Q99965 735 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TREX2Q9BQ50 279 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 XYLT2Q9H1B5 865 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms