RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MMS22LQ6ZRQ5 1243 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 OR6Y1Q8NGX8 325 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 NTN5Q8WTR8 489 aaPredicted RBP4.62□□□□□ -1.67
SMC4-225ENST00000497203 THAP4Q8WY91 577 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 OVCA2Q8WZ82 227 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 VPS50Q96JG6 964 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 UBXN10Q96LJ8 280 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 EIF3CQ99613 913 aaKnown RBP4.62□□□□□ -1.67
SMC4-225ENST00000497203 PRDM8Q9NQV8 689 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 C9orf78Q9NZ63 289 aaPredicted RBP4.62□□□□□ -1.67
SMC4-225ENST00000497203 LPAR3Q9UBY5 353 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 C19orf53Q9UNZ5 99 aaPredicted RBP4.62□□□□□ -1.67
SMC4-225ENST00000497203 ENTPD2Q9Y5L3 495 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 LRRFIP2Q9Y608 721 aaKnown RBP4.62□□□□□ -1.67
SMC4-225ENST00000497203 COX11Q9Y6N1 276 aa4.62□□□□□ -1.67
SMC4-225ENST00000497203 A8MVJ9 347 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 ORC4O43929 436 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 WDHD1O75717 1129 aaPredicted RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 TTLL1O95922 423 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 GYS1P13807 737 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 JUPP14923 745 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 ITPKBP27987 946 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 HTR7P34969 479 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 ADD2P35612 726 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 GSTM5P46439 218 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 CDK7P50613 346 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 CLCN2P51788 898 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 TPTEP56180 551 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 GRM4Q14833 912 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 LY6KQ17RY6 165 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 AKNAD1Q5T1N1 836 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 TSTD2Q5T7W7 516 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 DENND2CQ68D51 928 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 GRASPQ7Z6J2 395 aaPredicted RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 MOGAT3Q86VF5 341 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 FTSJ3Q8IY81 847 aaKnown RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 C11orf44Q8N8P7 122 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 USP13Q92995 863 aaPredicted RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 R3HDM4Q96D70 268 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 UROC1Q96N76 676 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 HAPLN3Q96S86 360 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 TIMP4Q99727 224 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 PYM1Q9BRP8 204 aaKnown RBP4.61□□□□□ -1.67
SMC4-225ENST00000497203 MLXIPQ9HAP2 919 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 CPNE5Q9HCH3 593 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 RXFP3Q9NSD7 469 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 SAGE1Q9NXZ1 904 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 RRN3Q9NYV6 651 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 ZNF69Q9UC07 566 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 LZTS1Q9Y250 596 aa4.61□□□□□ -1.67
SMC4-225ENST00000497203 COL11A2P13942 1736 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 POLR2AP24928 1970 aaKnown RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 EIF3FO00303 357 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 NCAM2O15394 837 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 DHHO43323 396 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 CBFA2T3O75081 653 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 TAF5LO75529 589 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 LARGE1O95461 756 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 FESP07332 822 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 IL6RP08887 468 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 EBLN1P0CF75 366 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 YY1P25490 414 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 KLRK1P26718 216 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 AARSP49588 968 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMC4-225ENST00000497203 MCM2P49736 904 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 ELLP55199 621 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 MTAPQ13126 283 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 FHL3Q13643 280 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 P3H1Q32P28 736 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 MTHFD1LQ6UB35 978 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 TRABD2AQ86V40 505 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 RASAL3Q86YV0 1011 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 CLASRPQ8N2M8 674 aaKnown RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 RP9Q8TA86 221 aaKnown RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 SCAMP5Q8TAC9 235 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 XAGE5Q8WWM1 108 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 CPT1BQ92523 772 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 ZNF764Q96H86 408 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 TRAPPC9Q96Q05 1148 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 PAAF1Q9BRP4 392 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 BRD8Q9H0E9 1235 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 TAF1DQ9H5J8 278 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 ELAC1Q9H777 363 aaKnown RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 FSCN3Q9NQT6 498 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 ARHGEF3Q9NR81 526 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 SERTAD4Q9NUC0 356 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 NDUFAF4Q9P032 175 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 ARPP21Q9UBL0 812 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 CCNL1Q9UK58 526 aaPredicted RBP4.6□□□□□ -1.67
SMC4-225ENST00000497203 ADAM21Q9UKJ8 722 aa4.6□□□□□ -1.67
SMC4-225ENST00000497203 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 H0Y3Z8 333 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 PMPCBO75439 489 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 VNN1O95497 513 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms