RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PRPF39Q86UA1 669 aaKnown RBP15.9■□□□□ 0.14
CALD1-222ENST00000495522 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 KIF2BQ8N4N8 673 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 ZNF398Q8TD17 642 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 LRRN4Q8WUT4 740 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 CSPG4P5Q96PW8 444 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 MANSC1Q9H8J5 431 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 ZNF180Q9UJW8 692 aa15.9■□□□□ 0.14
CALD1-222ENST00000495522 GNEQ9Y223 722 aaKnown RBP15.9■□□□□ 0.14
CALD1-222ENST00000495522 C1QAP02745 245 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 DHRS4L1P0CG22 281 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 TPSB2P20231 275 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 PRKCHP24723 683 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 SLC10A2Q12908 348 aaPredicted RBP15.89■□□□□ 0.13
CALD1-222ENST00000495522 TPSAB1Q15661 275 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 EFHC1Q5JVL4 640 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 SH2D5Q6ZV89 423 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 CHSY1Q86X52 802 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 CTAGE3PQ8IX95 158 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 PPM1NQ8N819 430 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 TMEM40Q8WWA1 233 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 TNIP3Q96KP6 325 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 C12orf65Q9H3J6 166 aaKnown RBP15.89■□□□□ 0.13
CALD1-222ENST00000495522 ZNF236Q9UL36 1845 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 HUS1O60921 280 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 KRT37O76014 449 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 KRT16P08779 473 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 PYGBP11216 843 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 MAGEA3P43357 314 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 ADAM17P78536 824 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 PRAMEF19Q5SWL8 479 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 ZNF618Q5T7W0 954 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 EGFL6Q8IUX8 553 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 ADGRF2Q8IZF7 708 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 TRIM33Q9UPN9 1127 aa15.89■□□□□ 0.13
CALD1-222ENST00000495522 C2CD2LO14523 706 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 XPO1O14980 1071 aaKnown RBP15.88■□□□□ 0.13
CALD1-222ENST00000495522 METTL18O95568 372 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 APOEP02649 317 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
CALD1-222ENST00000495522 MATKP42679 507 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 ETV4P43268 484 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 PSEN2P49810 448 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 IRF5Q13568 498 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 HIC1Q14526 733 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 UBXN11Q5T124 520 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 LGSNQ5TDP6 509 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 HEATR6Q6AI08 1181 aaKnown RBP15.88■□□□□ 0.13
CALD1-222ENST00000495522 MAGEB5Q9BZ81 275 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 CXorf56Q9H5V9 222 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 NPHS2Q9NP85 383 aa15.88■□□□□ 0.13
CALD1-222ENST00000495522 TRIM49D1C9J1S8 452 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 FAM155BO75949 473 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 ARL4AP40617 200 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 SLC8A3P57103 927 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 NBPF20Q3BBV1 942 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 SPDYAQ5MJ70 313 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 NCBP2-AS2Q69YL0 99 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 CEP57Q86XR8 500 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 B3GALNT2Q8NCR0 500 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 APBB2Q92870 758 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 FAM111AQ96PZ2 611 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 RAB3IPQ96QF0 476 aaPredicted RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 PTPN18Q99952 460 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 TSSK1BQ9BXA7 367 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 PRDM16Q9HAZ2 1276 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 PLAC1Q9HBJ0 212 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 GOLGA2P5Q9HBQ8 144 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 XAB2Q9HCS7 855 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 DTLQ9NZJ0 730 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 RCOR3Q9P2K3 495 aaPredicted RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 USP3Q9Y6I4 520 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 CXorf49A8MYA2 514 aaPredicted RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 HACD1B0YJ81 288 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 COPEO14579 308 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 TREHO43280 583 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 AMPD1P23109 780 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 WARSP23381 471 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 TKTP29401 623 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 SULT1E1P49888 294 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 FKBP1BP68106 108 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 SEMA5AQ13591 1074 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 SLC25A52Q3SY17 297 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 PREPLQ4J6C6 727 aaPredicted RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 UNC5AQ6ZN44 842 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 ZNF534Q76KX8 674 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 NLRP9Q7RTR0 991 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 PSTKQ8IV42 348 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 TFB1MQ8WVM0 346 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 SIGLEC10Q96LC7 697 aa15.87■□□□□ 0.13
CALD1-222ENST00000495522 HNRNPABQ99729 332 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 EBNA1BP2Q99848 306 aaKnown RBP15.87■□□□□ 0.13
CALD1-222ENST00000495522 IQCGQ9H095 443 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms