RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FBXO16Q8IX29 292 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-207ENST00000494090 TBCBQ99426 244 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 TSEN34Q9BSV6 310 aaKnown RBP19.69■□□□□ 0.74
COL27A1-207ENST00000494090 MTFR1LQ9H019 292 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 SEPT3Q9UH03 358 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 DYRK1BQ9Y463 629 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 DEFA1P59665 94 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 DEFA3P59666 94 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 ZDHHC17Q8IUH5 632 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 UTP6Q9NYH9 597 aaKnown RBP19.69■□□□□ 0.74
COL27A1-207ENST00000494090 PCDHGC5Q9Y5F6 944 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 STRNO43815 780 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 CYP2F1P24903 491 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 RHOAP61586 193 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 FBXO47Q5MNV8 452 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 ANKRD27Q96NW4 1050 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 YME1L1Q96TA2 773 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 STARD7Q9NQZ5 370 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 DDX28Q9NUL7 540 aaKnown RBP19.69■□□□□ 0.74
COL27A1-207ENST00000494090 ACOT9Q9Y305 439 aa19.69■□□□□ 0.74
COL27A1-207ENST00000494090 MAGEB16A2A368 324 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 CYP2W1Q8TAV3 490 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 SLC12A8A0AV02 714 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 CARNS1A5YM72 827 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 ATP6V1B1P15313 513 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 FAM131BQ86XD5 332 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 NINJ2Q9NZG7 142 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 VPS28Q9UK41 221 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 MAP2K7O14733 419 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 C9orf131Q5VYM1 1079 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 CARNMT1Q8N4J0 409 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 CPB2Q96IY4 423 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 CAMKK2Q96RR4 588 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 THUMPD3Q9BV44 507 aaKnown RBP19.68■□□□□ 0.74
COL27A1-207ENST00000494090 KIAA1683Q9H0B3 1180 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 FBXO44Q9H4M3 255 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 TCF3P15923 654 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 TFE3P19532 575 aaPredicted RBP19.68■□□□□ 0.74
COL27A1-207ENST00000494090 AXLP30530 894 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 BTKQ06187 659 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 MPP3Q13368 585 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 WASHC2DQ5SRD0 308 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 COLGALT1Q8NBJ5 622 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 SH3GL1Q99961 368 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 TMEM245Q9H330 911 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 TLR8Q9NR97 1041 aaKnown RBP19.68■□□□□ 0.74
COL27A1-207ENST00000494090 PCDHB12Q9Y5F1 795 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 PPLO60437 1756 aa19.68■□□□□ 0.74
COL27A1-207ENST00000494090 USP1O94782 785 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 IFNA14P01570 189 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 TRMT5Q32P41 509 aaKnown RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 ERMARDQ5T6L9 678 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 TNFRSF8P28908 595 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 CLK1P49759 484 aaKnown RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 PDPK2PQ6A1A2 396 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 INPP5DQ92835 1189 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 MTG1Q9BT17 334 aaPredicted RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 BARX2Q9UMQ3 279 aaPredicted RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 H3BRB1 525 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 ALDH2P05091 517 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 MPOP05164 745 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 CCDC33Q8N5R6 958 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 SPATC1LQ9H0A9 340 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 TUT1Q9H6E5 874 aaKnown RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 IMPAD1Q9NX62 359 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 NCKIPSDQ9NZQ3 722 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 VTNP04004 478 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 EFEMP1Q12805 493 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 OLFML2BQ68BL8 750 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 FAM163AQ96GL9 167 aaPredicted RBP19.67■□□□□ 0.74
COL27A1-207ENST00000494090 CACNA2D2Q9NY47 1150 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 V9GYQ6 96 aa19.67■□□□□ 0.74
COL27A1-207ENST00000494090 CYP3A4P08684 503 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 DSG3P32926 999 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 ELK3P41970 407 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 GLRBP48167 497 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 SOX10P56693 466 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 RETSATQ6NUM9 610 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 TAF2Q6P1X5 1199 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 TDRD5Q8NAT2 981 aaKnown RBP19.66■□□□□ 0.74
COL27A1-207ENST00000494090 KLHL4Q9C0H6 718 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 EXOSC4Q9NPD3 245 aaKnown RBP19.66■□□□□ 0.74
COL27A1-207ENST00000494090 CXCL8P10145 99 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 PRKCIP41743 596 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 BMPR2Q13873 1038 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 ZNF438Q7Z4V0 828 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 VTA1Q9NP79 307 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 INTS13Q9NVM9 706 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 CYTH3O43739 400 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 VGLL2Q8N8G2 317 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 PSMC3P17980 439 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 C3orf67Q6ZVT6 689 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 ASB7Q9H672 318 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 LZTS1Q9Y250 596 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 MANSC4A6NHS7 340 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-207ENST00000494090 PRR23D1E9PI22 279 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-207ENST00000494090 GLP2RO95838 553 aa19.66■□□□□ 0.74
COL27A1-207ENST00000494090 PRR23D2P0DMB1 279 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms