RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NDRG2Q9UN36 371 aaKnown RBP14.05□□□□□ -0.16
MSH6-208ENST00000493177 SCINQ9Y6U3 715 aa14.05□□□□□ -0.16
MSH6-208ENST00000493177 FAM170BA6NMN3 283 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 CCP110O43303 1012 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 GRAP2O75791 330 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 GJB6O95452 261 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 CYP1A2P05177 515 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 CD72P21854 359 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 DDX6P26196 483 aaKnown RBP eCLIP14.04□□□□□ -0.16
MSH6-208ENST00000493177 NOP2P46087 812 aaKnown RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 KPNA1P52294 538 aaPredicted RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 DAOAP59103 153 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 RNASE9P60153 205 aaKnown RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 ANGPT1Q15389 498 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 DCUN1D2Q6PH85 259 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 C3orf20Q8ND61 904 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 SLITRK1Q96PX8 696 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 TSGA10Q9BZW7 698 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 TRPV4Q9HBA0 871 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 MRPL47Q9HD33 250 aaKnown RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 LTB4R2Q9NPC1 389 aa14.04□□□□□ -0.16
MSH6-208ENST00000493177 THG1LQ9NWX6 298 aaKnown RBP14.04□□□□□ -0.16
MSH6-208ENST00000493177 HELZP42694 1942 aaKnown RBP14.03□□□□□ -0.16
MSH6-208ENST00000493177 ANAPC1Q9H1A4 1944 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 A0A0U1RQJ8 604 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 RCCD1A6NED2 376 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 ABL1P00519 1130 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 KRT3P12035 628 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 TAF10Q12962 218 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 ARHGAP29Q52LW3 1261 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 EFHC1Q5JVL4 640 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 OLFML1Q6UWY5 402 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 CMTM8Q8IZV2 173 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 ARHGAP18Q8N392 663 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 CELF5Q8N6W0 485 aaKnown RBP14.03□□□□□ -0.16
MSH6-208ENST00000493177 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 IRGQQ8WZA9 623 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 PIWIL1Q96J94 861 aaKnown RBP14.03□□□□□ -0.16
MSH6-208ENST00000493177 NELL2Q99435 816 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 SMG9Q9H0W8 520 aaKnown RBP14.03□□□□□ -0.16
MSH6-208ENST00000493177 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 LZTFL1Q9NQ48 299 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 SPATA6Q9NWH7 488 aaPredicted RBP14.03□□□□□ -0.16
MSH6-208ENST00000493177 GMIPQ9P107 970 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 SCML2Q9UQR0 700 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 ZKSCAN5Q9Y2L8 839 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 USP3Q9Y6I4 520 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 PIAS3Q9Y6X2 628 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 NCANO14594 1321 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 PATJQ8NI35 1801 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 MYO16Q9Y6X6 1858 aa14.03□□□□□ -0.16
MSH6-208ENST00000493177 COL4A2P08572 1712 aa14.02□□□□□ -0.16
MSH6-208ENST00000493177 A0A1W2PQH9 124 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 MACROD2A1Z1Q3 448 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 SIGLEC16A6NMB1 481 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 E7ENQ6 273 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 CAPN9O14815 690 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 CHADO15335 359 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 PJA2O43164 708 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 BUB1O43683 1085 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 KRT86O43790 486 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 PRAMEF12O95522 483 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 F11P03951 625 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 CKMP06732 381 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 GSCP56915 257 aaPredicted RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 YWHAGP61981 247 aaKnown RBP eCLIP14.02□□□□□ -0.17
MSH6-208ENST00000493177 MAMLD1Q13495 774 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TAF5Q15542 800 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 BTBD8Q5XKL5 378 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TXNDC8Q6A555 127 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 PM20D1Q6GTS8 502 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 PLEKHA7Q6IQ23 1121 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 CC2D1AQ6P1N0 951 aaPredicted RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 RHOT2Q8IXI1 618 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TTC8Q8TAM2 541 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 ZNF564Q8TBZ8 553 aaPredicted RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 RFFLQ8WZ73 363 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 FAM3CQ92520 227 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TRMT2BQ96GJ1 504 aaKnown RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 MCEEQ96PE7 176 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 SLC46A2Q9BY10 475 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 KIF9Q9HAQ2 790 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.17
MSH6-208ENST00000493177 ASNSD1Q9NWL6 643 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 OBP2AQ9NY56 170 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 IL37Q9NZH6 218 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 TRPM5Q9NZQ8 1165 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 UVRAGQ9P2Y5 699 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 GUCA1BQ9UMX6 200 aa14.02□□□□□ -0.17
MSH6-208ENST00000493177 ZDBF2Q9HCK1 2354 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms