RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PAPSS1O43252 624 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 LATS1O95835 1130 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 EGFP01133 1207 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 GLI1P08151 1106 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 NCAM1P13591 858 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 SOX5P35711 763 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 STAT1P42224 750 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 HARS2P49590 506 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 ANO4Q32M45 955 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZDHHC17Q8IUH5 632 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 MAML2Q8IZL2 1156 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 WDTC1Q8N5D0 677 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 C1orf131Q8NDD1 294 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 DDX1Q92499 740 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 FAM149B1Q96BN6 582 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 SERPINB11Q96P15 392 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 CPXM1Q96SM3 734 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 PNKPQ96T60 521 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 POPDC2Q9HBU9 364 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 RBM12Q9NTZ6 932 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 ASNSD1Q9NWL6 643 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 WDR35Q9P2L0 1181 aa11.13□□□□□ -0.63
CDC42SE1-206ENST00000492796 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 CHURC1-FNTBB4DL54 471 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 CAPN9O14815 690 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 HSF2BPO75031 334 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 ATG13O75143 517 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 RNF40O75150 1001 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 GFPT2O94808 682 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 KLKB1P03952 638 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 HMBSP08397 361 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 SP9P0CG40 484 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 NBL1P41271 181 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZNF445P59923 1031 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 YWHAZP63104 245 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 RING1Q06587 406 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 GAS6Q14393 721 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 PTPN20Q4JDL3 420 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 Q6ZS52 159 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 NOP9Q86U38 636 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 TMEM25Q86YD3 366 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 DENND1CQ8IV53 801 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 FAM217AQ8IXS0 508 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 CPXM2Q8N436 756 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 XPO6Q96QU8 1125 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 BBS2Q9BXC9 721 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 SYNCQ9H7C4 482 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 FBRSL1Q9HCM7 1045 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 SFMBT1Q9UHJ3 866 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 STOML2Q9UJZ1 356 aa11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 AGO1Q9UL18 857 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-206ENST00000492796 FANCMQ8IYD8 2048 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 NEDD8-MDP1E9PL57 170 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 CACNG3O60359 315 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TULP3O75386 442 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 KAT7O95251 611 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 SERPINC1P01008 464 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 PENKP01210 267 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 IGLV3-27P01718 113 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 ERBB2P04626 1255 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 APODP05090 189 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 FYNP06241 537 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TYRP14679 529 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 GRIA2P42262 883 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 CXCL12P48061 93 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 NRLP54845 237 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TBX4P57082 545 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 CDR2Q01850 454 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 CSTF1Q05048 431 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TAF3Q5VWG9 929 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 OLFML1Q6UWY5 402 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TRIM72Q6ZMU5 477 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 TPGS1Q6ZTW0 290 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 SLC26A9Q7LBE3 791 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 LUZP1Q86V48 1076 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
CDC42SE1-206ENST00000492796 UNC45BQ8IWX7 931 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms