RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GRAMD1CQ8IYS0 662 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 HDDC3Q8N4P3 179 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CADM4Q8NFZ8 388 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CCDC34Q96HJ3 373 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 IRX2Q9BZI1 471 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ZDHHC5Q9C0B5 715 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 NMUR1Q9HB89 426 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM8AQ9HCN3 771 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 FAM49BQ9NUQ9 324 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 OSER1Q9NX31 292 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CALCOCO1Q9P1Z2 691 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 HMGXB4Q9UGU5 601 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CIZ1Q9ULV3 898 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CNOT1A5YKK6 2376 aaKnown RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 CEP295Q9C0D2 2601 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ZFHX4Q86UP3 3567 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1B0GVL5 298 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1W2PQ27 194 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1W2PQ64 194 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1W2PQH9 124 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 PRRT4C9JH25 899 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 CYP26A1O43174 497 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 OPHN1O60890 802 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 STC2O76061 302 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 IGLV3-19P01714 112 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 CYBBP04839 570 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 IRF1P10914 325 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 GNSP15586 552 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 NDUFV2P19404 249 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ADORA2BP29275 332 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 OXTRP30559 389 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 SYKP43405 635 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 GCLMP48507 274 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF445P59923 1031 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 KRT85P78386 507 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 PPP3CAQ08209 521 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 DPYDQ12882 1025 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 FOXC1Q12948 553 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 STARD3Q14849 445 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 UAP1L1Q3KQV9 507 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 RAB41Q5JT25 222 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 EGFLAMQ63HQ2 1017 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ARHGAP17Q68EM7 881 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 PM20D1Q6GTS8 502 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 SPOPLQ6IQ16 392 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 RINLQ6ZS11 566 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 GPRIN1Q7Z2K8 1008 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 SCD5Q86SK9 330 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 MIB1Q86YT6 1006 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 FAM186BQ8IYM0 893 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 CPXM2Q8N436 756 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 OTUD6BQ8N6M0 293 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 FRMD1Q8N878 549 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 TAS1R2Q8TE23 839 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 FOXD4L4Q8WXT5 416 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 WBP2Q969T9 261 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM176AQ96HP8 235 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 MRGPRX1Q96LB2 322 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 SPATA32Q96LK8 384 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 TWNKQ96RR1 684 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 SCAND2PQ9GZW5 306 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 PCED1AQ9H1Q7 454 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 APOBEC3GQ9HC16 384 aaKnown RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ITM2CQ9NQX7 267 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 THAP10Q9P2Z0 257 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-212ENST00000492407 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 STRIP2Q9ULQ0 834 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 MSRB2Q9Y3D2 182 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 ATP6V1DQ9Y5K8 247 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 USP24Q9UPU5 2620 aa9.59□□□□□ -0.87
HDAC3-212ENST00000492407 MYO16Q9Y6X6 1858 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 TRIM24O15164 1050 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 NDUFS2O75306 463 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 CFIP05156 583 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 CD6P30203 668 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ORC1Q13415 861 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF423Q2M1K9 1284 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ZCWPW2Q504Y3 356 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 FYB2Q5VWT5 728 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-212ENST00000492407 KRBA2Q6ZNG9 492 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 TPGS1Q6ZTW0 290 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ARMCX6Q7L4S7 300 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 FAM217AQ8IXS0 508 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 SCML4Q8N228 414 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 TRIML1Q8N9V2 468 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 ANKRD52Q8NB46 1076 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 FBXL13Q8NEE6 735 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 DEFB124Q8NES8 71 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 DNASE2BQ8WZ79 361 aa9.58□□□□□ -0.88
HDAC3-212ENST00000492407 GATA6Q92908 595 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms