RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SMARCD1Q96GM5 515 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 TMEM176AQ96HP8 235 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 CABS1Q96KC9 395 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 KREMEN1Q96MU8 473 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 NT5C1BQ96P26 610 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 LRRC3BQ96PB8 259 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 NCAPGQ9BPX3 1015 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 SMG9Q9H0W8 520 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 CSNK1G1Q9HCP0 422 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 KRT82Q9NSB4 513 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 GGA2Q9UJY4 613 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 HHLA1C9JL84 531 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ECI2O75521 394 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 FGF19O95750 216 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 FAM107AO95990 144 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CFHP08603 1231 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ANXA13P27216 316 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CDC25CP30307 473 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 MAP3K7CLP57077 242 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 KLHL30Q0D2K2 578 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CUL1Q13616 776 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 RAPGEF1Q13905 1077 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 HLTFQ14527 1009 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■■□□□ 13.4
BRCA1-219ENST00000491747 IFI16Q16666 785 aaKnown RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CEP85LQ5SZL2 805 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 C10orf76Q5T2E6 689 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 DPY19L2P1Q6NXN4 242 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 VITQ6UXI7 678 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 LRIG3Q6UXM1 1119 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CLEC20AQ6ZU45 233 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 GPRIN1Q7Z2K8 1008 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ARID3BQ8IVW6 561 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 UBALD2Q8IYN6 164 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 PPM1KQ8N3J5 372 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 MAB21L3Q8N8X9 362 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ZNF473Q8WTR7 871 aaKnown RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CASKIN2Q8WXE0 1202 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 SMARCD2Q92925 531 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ELSPBP1Q96BH3 223 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 LRRC45Q96CN5 670 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 HEXIM2Q96MH2 286 aaKnown RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 SLC22A12Q96S37 553 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 LRFN3Q9BTN0 628 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 TTLL2Q9BWV7 592 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 LSM14BQ9BX40 385 aaKnown RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 SLITRK6Q9H5Y7 841 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 TASP1Q9H6P5 420 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 TRPV4Q9HBA0 871 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 GCNT4Q9P109 453 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 C2orf78A6NCI8 922 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 TMEM221A6NGB7 291 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 BTNL10A8MVZ5 291 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 M0R296 226 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 PRAMEF12O95522 483 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 MYZAPP0CAP1 466 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 GRM2Q14416 872 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 RPS6KA1Q15418 735 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 HFE2Q6ZVN8 426 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 NLRP14Q86W24 1093 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CCT8L2Q96SF2 557 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 CYP2S1Q96SQ9 504 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 MYCBPQ99417 103 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ZSWIM1Q9BR11 485 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 GPR88Q9GZN0 384 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ISCUQ9H1K1 167 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ZFP14Q9HCL3 533 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 SIX2Q9NPC8 291 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 DMAP1Q9NPF5 467 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 PLCB1Q9NQ66 1216 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 AIPL1Q9NZN9 384 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ADAMTS1Q9UHI8 967 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 AJAP1Q9UKB5 411 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-219ENST00000491747 PLAAQ9Y263 795 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 KMT2EQ8IZD2 1858 aa9.85□□□□□ -0.83
BRCA1-219ENST00000491747 ATP8B3O60423 1300 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 A0A087X0T9 212 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 RAD51CO43502 376 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 FAM228BP0C875 321 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 SRFP11831 508 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 TBXAS1P24557 533 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-219ENST00000491747 PON1P27169 355 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 PGFP49763 221 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 SLC5A3P53794 718 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 CETN1Q12798 172 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 ASIC2Q16515 512 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 NUP93Q8N1F7 819 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 C3orf20Q8ND61 904 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 RIN3Q8TB24 985 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 TFAP2BQ92481 460 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 PBKQ96KB5 322 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 CALR3Q96L12 384 aaKnown RBP9.84□□□□□ -0.83
BRCA1-219ENST00000491747 CEP295NLQ96MC4 621 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 C1QTNF1Q9BXJ1 281 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 UBE2TQ9NPD8 197 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-219ENST00000491747 IL37Q9NZH6 218 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 UXTQ9UBK9 157 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-219ENST00000491747 TMEM59LQ9UK28 342 aa9.84□□□□□ -0.83
BRCA1-219ENST00000491747 CCL26Q9Y258 94 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms