RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ADIGQ0VDE8 80 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 GAB4Q2WGN9 574 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 SPDYCQ5MJ68 293 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 SLC36A4Q6YBV0 504 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 C12orf40Q86WS4 652 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 FAM114A1Q8IWE2 563 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF557Q8N988 423 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 UBA3Q8TBC4 463 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 DDI1Q8WTU0 396 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 IRGQQ8WZA9 623 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 HSFY1Q96LI6 401 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 DDX50Q9BQ39 737 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 ANAPC1Q9H1A4 1944 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 PARD6AQ9NPB6 346 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 RWDD2AQ9UIY3 292 aa17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-217ENST00000491330 FANCMQ8IYD8 2048 aa17.33■□□□□ 0.37
PDLIM2-217ENST00000491330 TYW5A2RUC4 315 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 M0QYV0 167 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 SGK1O00141 431 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 O00370 1275 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 GFRA2O00451 464 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 SLC30A4O14863 429 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 MDM4O15151 490 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 TIMM44O43615 452 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 CAVIN2O95810 425 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 KRT5P13647 590 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 LCP1P13796 627 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 ACADSBP45954 432 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 ATXN1P54253 815 aaKnown RBP17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 MPPE1Q53F39 396 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 BSPRYQ5W0U4 402 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 CYP2U1Q7Z449 544 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 DENND1CQ8IV53 801 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 UNC45BQ8IWX7 931 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 SCML4Q8N228 414 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 RBBP8NLQ8NC74 664 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 DUSP15Q9H1R2 295 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
PDLIM2-217ENST00000491330 KHNYNO15037 678 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 AP5Z1O43299 807 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 SYNCRIPO60506 623 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 LATS1O95835 1130 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 BMP6P22004 513 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 TGM1P22735 817 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 SLC11A2P49281 568 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 DHPSP49366 369 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 PGFP49763 221 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 CAMK4Q16566 473 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 EMC10Q5UCC4 262 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 Q6ZNB5 142 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 RRAGAQ7L523 313 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 RABEPKQ7Z6M1 372 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 CPXM2Q8N436 756 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 MDGA1Q8NFP4 955 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 BHMTQ93088 406 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 IRX2Q9BZI1 471 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 POLR3BQ9NW08 1133 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-217ENST00000491330 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 CAPN9O14815 690 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 MTIF2P46199 727 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 LIMK1P53667 647 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 DAB2IPQ5VWQ8 1189 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 NUGGCQ68CJ6 796 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 PMS2CLQ68D20 193 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 GBP6Q6ZN66 633 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 FMNL3Q8IVF7 1028 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 INTS2Q9H0H0 1204 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 UBE2TQ9NPD8 197 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 ST7Q9NRC1 585 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 PLK2Q9NYY3 685 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 AGO1Q9UL18 857 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 SLC27A6Q9Y2P4 619 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 OTOGLQ3ZCN5 2332 aa17.31■□□□□ 0.36
PDLIM2-217ENST00000491330 DCLK1O15075 740 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 GREM1O60565 184 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 NDUFS2O75306 463 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 USP8P40818 1118 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 P2RY2P41231 377 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 TMEM92Q6UXU6 159 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 PHTF2Q8N3S3 785 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 EDEM1Q92611 657 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 WBP2Q969T9 261 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 NOX5Q96PH1 765 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 NUSAP1Q9BXS6 441 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 PLA2G4CQ9UP65 541 aa17.3■□□□□ 0.36
PDLIM2-217ENST00000491330 DCDC2BA2VCK2 349 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 IRAK2O43187 625 aa17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 PENKP01210 267 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-217ENST00000491330 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms