RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SDE2Q6IQ49 451 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 TRMT11Q7Z4G4 463 aaKnown RBP16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 DENND1CQ8IV53 801 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 CCDC47Q96A33 483 aaKnown RBP16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 HSPA12BQ96MM6 686 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 CISHQ9NSE2 258 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 MARK1Q9P0L2 795 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 WASF3Q9UPY6 502 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 USP3Q9Y6I4 520 aa16.7■□□□□ 0.26
ERGIC3-217ENST00000488935 NUMA1Q14980 2115 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 SLC12A8A0AV02 714 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 MAPK13O15264 365 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 AP5Z1O43299 807 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 HYAL3O43820 417 aaPredicted RBP16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 TSPAN3O60637 253 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 RALAP11233 206 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 LRMPQ12912 555 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 BYSLQ13895 437 aaKnown RBP16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 CBWD6Q4V339 395 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 ZCWPW2Q504Y3 356 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 FYB2Q5VWT5 728 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 KRT39Q6A163 491 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 NUDT18Q6ZVK8 323 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 CCDC186Q7Z3E2 898 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 PIGZQ86VD9 579 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 RGL4Q8IZJ4 473 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 TMEM176AQ96HP8 235 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 MRGPRX1Q96LB2 322 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 SCNM1Q9BWG6 230 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 AGO1Q9UL18 857 aaKnown RBP16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 PCDH15Q96QU1 1955 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 WDFY3Q8IZQ1 3526 aa16.69■□□□□ 0.26
ERGIC3-217ENST00000488935 AKAP13Q12802 2813 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 PIK3R2O00459 728 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 MYL1P05976 194 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 CEACAM1P13688 526 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 CSRP1P21291 193 aaKnown RBP16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 IL12RB1P42701 662 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 MXI1P50539 228 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 MFAP3P55082 362 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 LMAN2Q12907 356 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 NFIL3Q16649 462 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 DUOXA1Q1HG43 343 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 GOLGA7BQ2TAP0 167 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 FUT11Q495W5 492 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 PREPLQ4J6C6 727 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 ISM2Q6H9L7 571 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 CCDC150Q8NCX0 1101 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 UBA3Q8TBC4 463 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 GABRG3Q99928 467 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 ULBP1Q9BZM6 244 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 SLC6A14Q9UN76 642 aa16.68■□□□□ 0.26
ERGIC3-217ENST00000488935 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 TRIM21P19474 475 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 RPL13P26373 211 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 PRCPP42785 496 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 TKTL1P51854 596 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 ATXN3P54252 364 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 YWHAGP61981 247 aaKnown RBP eCLIP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 SIM1P81133 766 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 GFPT1Q06210 699 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 KLHDC10Q6PID8 442 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 UNQ6494/PRO21346Q6UXR6 183 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 SLC36A4Q6YBV0 504 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 RSRC2Q7L4I2 434 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 MINDY1Q8N5J2 469 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 ZNF366Q8N895 744 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 FBXL13Q8NEE6 735 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 KCNV2Q8TDN2 545 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 EDEM1Q92611 657 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 MKRN2Q9H000 416 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 CAPN10Q9HC96 672 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 MARCH2Q9P0N8 246 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 SFMBT1Q9UHJ3 866 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 FBXO10Q9UK96 956 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 ZMIZ1Q9ULJ6 1067 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 IGF2RP11717 2491 aa16.67■□□□□ 0.26
ERGIC3-217ENST00000488935 KCNJ18B7U540 433 aa16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 ZBTB24O43167 697 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 NDUFS2O75306 463 aa16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 PROS1P07225 676 aa16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 HLA-EP13747 358 aa16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 PDE4CQ08493 712 aa16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-217ENST00000488935 TMEM215Q68D42 235 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms