RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 GM2AP17900 193 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 LHX1P48742 406 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 WDR4P57081 412 aaKnown RBP13.83□□□□□ -0.2
CHD1L-208ENST00000488864 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
CHD1L-208ENST00000488864 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 FUT10Q6P4F1 479 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 METTL23Q86XA0 190 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 TMEM86AQ8N2M4 240 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 PITPNM3Q9BZ71 974 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 HAO1Q9UJM8 370 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 CHD9Q3L8U1 2897 aa13.83□□□□□ -0.2
CHD1L-208ENST00000488864 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 LIN7AO14910 233 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 PEX11AO75192 247 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 UNGP13051 313 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 PTPN1P18031 435 aaKnown RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 ITIH2P19823 946 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 TARSP26639 723 aaKnown RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SKIV2L2P42285 1042 aaKnown RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 VPS41P49754 854 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 RABGGTBP53611 331 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 RWDD2BP57060 319 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 NOMO3P69849 1222 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 MDH1BQ5I0G3 518 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 LLGL2Q6P1M3 1020 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 TNIP3Q96KP6 325 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SYT15Q9BQS2 421 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 TMEM175Q9BSA9 504 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 ZFATQ9P243 1243 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 FSCN2O14926 492 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CYP11A1P05108 521 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 GOLGA7BQ2TAP0 167 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 FAM109BQ6ICB4 259 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CRYBG2Q8N1P7 616 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 WDTC1Q8N5D0 677 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SLCO2A1Q92959 643 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 ERP27Q96DN0 273 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SNF8Q96H20 258 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 RAB3IPQ96QF0 476 aaPredicted RBP13.82□□□□□ -0.2
CHD1L-208ENST00000488864 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 CHKBQ9Y259 395 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 NR2E3Q9Y5X4 410 aa13.82□□□□□ -0.2
CHD1L-208ENST00000488864 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.23e-7■■■■■ 175.4
CHD1L-208ENST00000488864 PIK3R2O00459 728 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 MED7O43513 233 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 TLL1O43897 1013 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 CSPG5O95196 566 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 NSFP46459 744 aaKnown RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 RTP2Q5QGT7 225 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 ANO7Q6IWH7 933 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 ARHGEF18Q6ZSZ5 1173 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 IGSF21Q96ID5 467 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 C11orf70Q9BRQ4 267 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 RNPEPL1Q9HAU8 725 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 DSEQ9UL01 958 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 DPPA5A6NC42 116 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 C2CD2LO14523 706 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 SPAG7O75391 227 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 CYP1A2P05177 515 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 MYOGP15173 224 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 TUBP50607 506 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 SHHQ15465 462 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 ACAD10Q6JQN1 1059 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 VSIG1Q86XK7 387 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 FAM13CQ8NE31 585 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 FBF1Q8TES7 1133 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 C9orf72Q96LT7 481 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 ZNF558Q96NG5 402 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 VN1R3Q9BXE9 311 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 RHOBTB2Q9BYZ6 727 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 LRMDAQ9H2I8 198 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
CHD1L-208ENST00000488864 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
CHD1L-208ENST00000488864 LGALS13Q9UHV8 139 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms