RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PDZD8Q8NEN9 1154 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 CAVIN3Q969G5 261 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 PIWIL1Q96J94 861 aaKnown RBP20.23■□□□□ 0.83
CCM2-216ENST00000488727 GCNAQ96QF7 691 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 MYADMQ96S97 322 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 ISCUQ9H1K1 167 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 TRPM5Q9NZQ8 1165 aa20.23■□□□□ 0.83
CCM2-216ENST00000488727 A0A1W2PQH9 124 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 C2orf78A6NCI8 922 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 AAK1Q2M2I8 961 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 HSP90B2PQ58FF3 399 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 SNX30Q5VWJ9 437 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 TXNDC8Q6A555 127 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 ZNF771Q7L3S4 317 aaPredicted RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 RHOT2Q8IXI1 618 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 IFT20Q8IY31 132 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 GSPT2Q8IYD1 628 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 SLC35G2Q8TBE7 412 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 ATXN2LQ8WWM7 1075 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 ZSWIM3Q96MP5 696 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 PSD3Q9NYI0 1048 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 YJEFN3A6XGL0 299 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 E7ENQ6 273 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 PGRMC1O00264 195 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 MMP8P22894 467 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 GABRB2P47870 512 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 PPP3CCP48454 512 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 DNA2P51530 1060 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 MRPS5P82675 430 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 GPR158Q5T848 1215 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 MMS22LQ6ZRQ5 1243 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 HFE2Q6ZVN8 426 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 DAAM2Q86T65 1068 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 IPO4Q8TEX9 1081 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 MRPS31Q92665 395 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 EXOC4Q96A65 974 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 PHF7Q9BWX1 381 aaPredicted RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 TLR8Q9NR97 1041 aaKnown RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 AMFRQ9UKV5 643 aa20.22■□□□□ 0.83
CCM2-216ENST00000488727 TTC7AQ9ULT0 858 aaPredicted RBP20.22■□□□□ 0.83
CCM2-216ENST00000488727 NUP210Q8TEM1 1887 aaPredicted RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 FBXO21O94952 628 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 NSFP46459 744 aaKnown RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 SLC7A5Q01650 507 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 PTP4A2Q12974 167 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 FAM183BPQ6ZVS7 135 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 PHF13Q86YI8 300 aaPredicted RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 EIF1ADQ8N9N8 165 aaKnown RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 MCRS1Q96EZ8 462 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 SLC22A12Q96S37 553 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 C11orf70Q9BRQ4 267 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 SLC46A2Q9BY10 475 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 GOLPH3Q9H4A6 298 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 SYNCQ9H7C4 482 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.831e-8■■□□□ 13.3
CCM2-216ENST00000488727 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 CDH7Q9ULB5 785 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 FAM50BQ9Y247 325 aa20.21■□□□□ 0.83
CCM2-216ENST00000488727 TCF20Q9UGU0 1960 aaKnown RBP20.21■□□□□ 0.83
CCM2-216ENST00000488727 TMCO5BA8MYB1 307 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 CCDC188H7C350 402 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 BUB1BO60566 1050 aaPredicted RBP20.2■□□□□ 0.82
CCM2-216ENST00000488727 GZMAP12544 262 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 GBP2P32456 591 aaPredicted RBP20.2■□□□□ 0.82
CCM2-216ENST00000488727 YWHAGP61981 247 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCM2-216ENST00000488727 ACAD10Q6JQN1 1059 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 OLFML1Q6UWY5 402 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 MON1BQ7L1V2 547 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 XYLT1Q86Y38 959 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 IRGQQ8WZA9 623 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 C18orf8Q96DM3 657 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 ARHGEF26Q96DR7 871 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 ASB2Q96Q27 587 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 SLITRK6Q9H5Y7 841 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 CCSER2Q9H7U1 834 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 OSGEPQ9NPF4 335 aa20.2■□□□□ 0.82
CCM2-216ENST00000488727 HELZP42694 1942 aaKnown RBP20.19■□□□□ 0.82
CCM2-216ENST00000488727 C2CD4DB7Z1M9 353 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 CEP104O60308 925 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 RTN2O75298 545 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 HEXIM1O94992 359 aaKnown RBP20.19■□□□□ 0.82
CCM2-216ENST00000488727 OAS1P00973 400 aaKnown RBP20.19■□□□□ 0.82
CCM2-216ENST00000488727 ARHGAP15Q53QZ3 475 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 OR6B2Q6IFH4 312 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 C11orf63Q6NUN7 778 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 CYP2S1Q96SQ9 504 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 KRT12Q99456 494 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 THAP2Q9H0W7 228 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 TASP1Q9H6P5 420 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 TRPC7Q9HCX4 862 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCM2-216ENST00000488727 USTQ9Y2C2 406 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 BHMG1C9JSJ3 638 aaPredicted RBP20.19■□□□□ 0.82
CCM2-216ENST00000488727 MTA2O94776 668 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 GLI1P08151 1106 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 LAMP2P13473 410 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 BMP1P13497 986 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms