RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 INTS13Q9NVM9 706 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 CALCOCO1Q9P1Z2 691 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 CTTNBP2NLQ9P2B4 639 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TBX21Q9UL17 535 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 NCOR2Q9Y618 2525 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 SCN5AQ14524 2016 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 RFX7Q2KHR2 1363 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 TOR1BO14657 336 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 CTNND1O60716 968 aaKnown RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 IGLV2-14P01704 120 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 IGKV5-2P06315 115 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 CSF1RP07333 972 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 HOXC6P09630 235 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 CD38P28907 300 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 GYG1P46976 350 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 HMGCS2P54868 508 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 ELLP55199 621 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 RPS7P62081 194 aaKnown RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 KRT85P78386 507 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 LRRC41Q15345 812 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 PREPLQ4J6C6 727 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 SYCE2Q6PIF2 218 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 TSHZ1Q6ZSZ6 1077 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 ANKRD33Q7Z3H0 272 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 CFAP52Q8N1V2 620 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 PDPRQ8NCN5 879 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 TOR1AIP2Q8NFQ8 470 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 EDC3Q96F86 508 aaKnown RBP5.59□□□□□ -1.51
BRCA1-217ENST00000487825 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 SPATA5L1Q9BVQ7 753 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 TANC1Q9C0D5 1861 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 PARP14Q460N5 1801 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 FOCADQ5VW36 1801 aa5.59□□□□□ -1.51
BRCA1-217ENST00000487825 USP24Q9UPU5 2620 aa5.59□□□□□ -1.52
BRCA1-217ENST00000487825 MED19A0JLT2 244 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 ANKRD18BA2A2Z9 1011 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 EPOPA6NHQ4 379 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 LRRC14BA6NHZ5 514 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 PROB1E7EW31 1015 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 CHL1O00533 1208 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 SEPT4O43236 478 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 SUN1O94901 812 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 RPLP2P05387 115 aaKnown RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 MYOGP15173 224 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 IL9P15248 144 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 CSF2RAP15509 400 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 MALP21145 153 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 CYP2C19P33261 490 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 FOLR3P41439 243 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 IRX3P78415 501 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 MC2RQ01718 297 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 DYRK1AQ13627 763 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 KCTD2Q14681 263 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 LEXMQ3ZCV2 418 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 ANO1Q5XXA6 986 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 CDC42EP5Q6NZY7 148 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 VWA1Q6PCB0 445 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 TTC7BQ86TV6 843 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 AOPEPQ8N6M6 819 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 NSUN6Q8TEA1 469 aaKnown RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 LPIN2Q92539 896 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 FBXL20Q96IG2 436 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 LRIG1Q96JA1 1093 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 FAM84BQ96KN1 310 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 HEPHQ9BQS7 1158 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 MTIF3Q9H2K0 278 aaKnown RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 LRRFIP2Q9Y608 721 aaKnown RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 CFAP20Q9Y6A4 193 aaKnown RBP5.58□□□□□ -1.52
BRCA1-217ENST00000487825 FAM208BQ5VWN6 2430 aa5.58□□□□□ -1.52
BRCA1-217ENST00000487825 ROBO3Q96MS0 1386 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 FRYLO94915 3013 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 MAPK8IP3Q9UPT6 1336 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 MCM3APO60318 1980 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 CCDC195A0A1B0GUA6 201 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 SLC15A5A6NIM6 579 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 F2RL2O00254 374 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 SMARCA1P28370 1054 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 IL12RB1P42701 662 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 CACNA2D1P54289 1103 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 ADKP55263 362 aaKnown RBP5.57□□□□□ -1.52
BRCA1-217ENST00000487825 PSMC1P62191 440 aaKnown RBP5.57□□□□□ -1.52
BRCA1-217ENST00000487825 DSC2Q02487 901 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 SPP2Q13103 211 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 CHAF1AQ13111 956 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-217ENST00000487825 UBE4AQ14139 1066 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 GRB14Q14449 540 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 EPHA10Q5JZY3 1008 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 KAZNQ674X7 775 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 TAPT1Q6NXT6 567 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 CCAR1Q8IX12 1150 aaKnown RBP5.57□□□□□ -1.52
BRCA1-217ENST00000487825 ADGRG5Q8IZF4 528 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 MIER2Q8N344 545 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 TMEM199Q8N511 208 aa5.57□□□□□ -1.52
BRCA1-217ENST00000487825 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-217ENST00000487825 ZNF384Q8TF68 577 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms