RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 P2RY13Q9BPV8 354 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 FAM86C1Q9NVL1 165 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 NAALADL1Q9UQQ1 740 aa15.42■□□□□ 0.06
USP4-212ENST00000486549 A0A1W2PQC6 194 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 GRAP2O75791 330 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 KLKB1P03952 638 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 FYNP06241 537 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 CHRNB1P11230 501 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 RPS9P46781 194 aaKnown RBP15.41■□□□□ 0.06
USP4-212ENST00000486549 GALK1P51570 392 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 SNX16P57768 344 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 CDR2Q01850 454 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 GRSF1Q12849 480 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP4-212ENST00000486549 FZD5Q13467 585 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 LRRC32Q14392 662 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 PPP2R5DQ14738 602 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 NR1I3Q14994 352 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 TAF5Q15542 800 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 NAA35Q5VZE5 725 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 FSTL4Q6MZW2 842 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 MSANTD2Q6P1R3 559 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 Q6ZNB5 142 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 TPGS1Q6ZTW0 290 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 ZNF677Q86XU0 584 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 DENND1CQ8IV53 801 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 ADAM32Q8TC27 787 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 DQX1Q8TE96 717 aaKnown RBP15.41■□□□□ 0.06
USP4-212ENST00000486549 CD101Q93033 1021 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 PLD4Q96BZ4 506 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 PHOX2BQ99453 314 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 DCLK3Q9C098 648 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 SPHK2Q9NRA0 654 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 SEPT11Q9NVA2 429 aaKnown RBP15.41■□□□□ 0.06
USP4-212ENST00000486549 SPATA6Q9NWH7 488 aaPredicted RBP15.41■□□□□ 0.06
USP4-212ENST00000486549 IFNKQ9P0W0 207 aa15.41■□□□□ 0.06
USP4-212ENST00000486549 HBS1LQ9Y450 684 aaKnown RBP15.41■□□□□ 0.06
USP4-212ENST00000486549 KIAA1549LQ6ZVL6 1849 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 ATG2BQ96BY7 2078 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 TRDMT1O14717 391 aaKnown RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 LAMTOR5O43504 91 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 LSM8O95777 96 aaKnown RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 EGFP01133 1207 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 CHRNB2P17787 502 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 CDH5P33151 784 aaPredicted RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 OPRD1P41143 372 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 YWHAZP63104 245 aaKnown RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 NOMO3P69849 1222 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 FMO1Q01740 532 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 GAD2Q05329 585 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 GAB4Q2WGN9 574 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 ZNF528Q3MIS6 628 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 C2CD6Q53TS8 623 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 TMEM196Q5HYL7 178 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 SYPL2Q5VXT5 272 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 Q6ZS52 159 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 C12orf40Q86WS4 652 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 ERICH1Q86X53 443 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 TMEM25Q86YD3 366 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 NAT16Q8N8M0 369 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 CPA5Q8WXQ8 436 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 BHMTQ93088 406 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 EXOC4Q96A65 974 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 CLDN23Q96B33 292 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 TRIM62Q9BVG3 475 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 POPDC2Q9HBU9 364 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 FBRSL1Q9HCM7 1045 aaKnown RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 FBXO4Q9UKT5 387 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 AGO1Q9UL18 857 aaKnown RBP15.4■□□□□ 0.06
USP4-212ENST00000486549 ZNF510Q9Y2H8 683 aa15.4■□□□□ 0.06
USP4-212ENST00000486549 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 NEDD8-MDP1E9PL57 170 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 FERP16591 822 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 SLC6A11P48066 632 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 HARS2P49590 506 aaKnown RBP15.39■□□□□ 0.05
USP4-212ENST00000486549 TBX4P57082 545 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 SLC6A3Q01959 620 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 KDSRQ06136 332 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 CCINQ13939 588 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 TRIP4Q15650 581 aaPredicted RBP15.39■□□□□ 0.05
USP4-212ENST00000486549 EFHC1Q5JVL4 640 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 DGKKQ5KSL6 1271 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 OLFML1Q6UWY5 402 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 TOGARAM2Q6ZUX3 1019 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 TAC4Q86UU9 113 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 MSANTD4Q8NCY6 345 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 BAP1Q92560 729 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 SERPINB11Q96P15 392 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 BBS2Q9BXC9 721 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
USP4-212ENST00000486549 CACNA1IQ9P0X4 2223 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 SYNJ2BP-COX16A0A087WUM0 186 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 GOLGA8SH3BPF8 625 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 HSF2BPO75031 334 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 DRD1P21728 446 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 MTAPQ13126 283 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 ASIC2Q16515 512 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 DCAF6Q58WW2 860 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 TRIM72Q6ZMU5 477 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 DEFB106AQ8N104 65 aa15.38■□□□□ 0.05
USP4-212ENST00000486549 C18orf8Q96DM3 657 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms