RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 OSBPL9Q96SU4 736 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 EPHX3Q9H6B9 360 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 ZNF334Q9HCZ1 680 aaPredicted RBP11.81□□□□□ -0.52
SND1-212ENST00000485871 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 ABCC13Q9NSE7 274 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 RRN3Q9NYV6 651 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 RAB21Q9UL25 225 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
SND1-212ENST00000485871 PSTPIP1O43586 416 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 SRGAP2O75044 1071 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 ZMYND10O75800 440 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 F11P03951 625 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 NCAM1P13591 858 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 MIPP30301 263 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 PSEN1P49768 467 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 SULT1E1P49888 294 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 CLCN6P51797 869 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 ATXN1P54253 815 aaKnown RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 ATP11AP98196 1134 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 PLD1Q13393 1074 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 CDO1Q16878 200 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 MAP9Q49MG5 647 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 WDR93Q6P2C0 686 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 POLNQ7Z5Q5 900 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 DNAJB7Q7Z6W7 309 aaPredicted RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 ALYREFQ86V81 257 aaKnown RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 DQX1Q8TE96 717 aaKnown RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 COG1Q8WTW3 980 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 FAM172AQ8WUF8 416 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 EDEM1Q92611 657 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 TRIM62Q9BVG3 475 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 SMOC2Q9H3U7 446 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 PLEKHA4Q9H4M7 779 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 TLR8Q9NR97 1041 aaKnown RBP11.8□□□□□ -0.52
SND1-212ENST00000485871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
SND1-212ENST00000485871 STAP1Q9ULZ2 295 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 ASB3Q9Y575 518 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 HCFC2Q9Y5Z7 792 aa11.8□□□□□ -0.52
SND1-212ENST00000485871 I6L893 689 aaPredicted RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 M0QYT0 321 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 PER2O15055 1255 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 IRAK2O43187 625 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 RNF8O76064 485 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 TRUB2O95900 331 aaKnown RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 POU2F2P09086 479 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 ARSEP51690 589 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 EPHB3P54753 998 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 EPHA5P54756 1037 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 TFF2Q03403 129 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CLUL1Q15846 466 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 ATP13A4Q4VNC1 1196 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 BTBD8Q5XKL5 378 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 ANKS1BQ7Z6G8 1248 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 RHOT1Q8IXI2 618 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 RASGEF1CQ8N431 466 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CMASQ8NFW8 434 aaPredicted RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 VN1R2Q8NFZ6 395 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CASP10Q92851 521 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 PSMB7Q99436 277 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 NCAPGQ9BPX3 1015 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 CARD9Q9H257 536 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 ANLNQ9NQW6 1124 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 MAN1C1Q9NR34 630 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 EHD2Q9NZN4 543 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 USP18Q9UMW8 372 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 MAGED2Q9UNF1 606 aaPredicted RBP11.79□□□□□ -0.52
SND1-212ENST00000485871 BDP1A6H8Y1 2624 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 DOCK4Q8N1I0 1966 aa11.79□□□□□ -0.52
SND1-212ENST00000485871 NUP210Q8TEM1 1887 aaPredicted RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 ZNF840PA6NDX5 716 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 C3orf70A6NLC5 250 aaPredicted RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 CAPN9O14815 690 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 ZNF185O15231 689 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 RFPL2O75678 378 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 OLFM2O95897 454 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 LRG1P02750 347 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 RARGP13631 454 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 CXCR5P32302 372 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 RDXP35241 583 aaKnown RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 TUBP50607 506 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 KCNQ1P51787 676 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 TAZQ16635 292 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 GLE1Q53GS7 698 aaKnown RBP11.78□□□□□ -0.52
SND1-212ENST00000485871 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
SND1-212ENST00000485871 AADACL2Q6P093 401 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms