RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 KCTD6Q8NC69 237 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 AGR3Q8TD06 166 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 MZB1Q8WU39 189 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 HTRA1Q92743 480 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 NSUN4Q96CB9 384 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 VPS50Q96JG6 964 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 FEM1CQ96JP0 617 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 AK8Q96MA6 479 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 SAMD11Q96NU1 681 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TXN2Q99757 166 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 NTPCRQ9BSD7 190 aaKnown RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 CCDC106Q9BWC9 280 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 OSBPL10Q9BXB5 764 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 CARD11Q9BXL7 1154 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 STK33Q9BYT3 514 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 GCOM2Q9BZD3 368 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 SENP6Q9GZR1 1112 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 MMADHCQ9H3L0 296 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 SYNCQ9H7C4 482 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
RTN4-213ENST00000485749 C17orf75Q9HAS0 396 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TMEM165Q9HC07 324 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PDE11AQ9HCR9 933 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 TM9SF3Q9HD45 589 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 KIF17Q9P2E2 1029 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 OGDHLQ9ULD0 1010 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 WDR37Q9Y2I8 494 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 PCDHB1Q9Y5F3 818 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 FHAD1B1AJZ9 1412 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 ADAMTS20P59510 1910 aa4.78□□□□□ -1.64
RTN4-213ENST00000485749 USP19O94966 1318 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 MROH5Q6ZUA9 1318 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 A0A1W2PPC4 97 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 OTOL1A6NHN0 477 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 C16orf96A6NNT2 1141 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 GOLGA6L19H0YKK7 550 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 STMND1H3BQB6 276 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 GTPBP1O00178 669 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 APOL1O14791 398 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 PLSCR1O15162 318 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ASAP2O43150 1006 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 CUTAO60888 179 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 OPHN1O60890 802 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 PEX11AO75192 247 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 CSPG5O95196 566 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ZBTB7AO95365 584 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 AFPP02771 609 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 RPSAP08865 295 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 GLI4P10075 376 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ACTN1P12814 892 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 CYP11B2P19099 503 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 IL11P20809 199 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 KCNA5P22460 613 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 YY1P25490 414 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 LONP1P36776 959 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 NNMTP40261 264 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 RGS2P41220 211 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ABCG1P45844 678 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ARF5P84085 180 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 MVKQ03426 396 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ACTN3Q08043 901 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 PPP3CAQ08209 521 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 CAMK2DQ13557 499 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 IL10RAQ13651 578 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ADCK5Q3MIX3 580 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ZACNQ401N2 412 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 FBXO48Q5FWF7 155 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 AKNAD1Q5T1N1 836 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ATPAF1Q5TC12 328 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 LRSAM1Q6UWE0 723 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ZYG11AQ6WRX3 759 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 C15orf52Q6ZUT6 534 aaKnown RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 FRMD5Q7Z6J6 570 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 GLB1L2Q8IW92 636 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 LINC01356Q8N9X3 169 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 GLB1L3Q8NCI6 653 aaPredicted RBP4.77□□□□□ -1.65
RTN4-213ENST00000485749 GMCL1P1Q8NEA9 526 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 OR56B2PQ8NGI1 322 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 OR8K3Q8NH51 312 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.77□□□□□ -1.651e-15■■□□□ 12.1
RTN4-213ENST00000485749 CEP76Q8TAP6 659 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 GRK7Q8WTQ7 553 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 WASF1Q92558 559 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 NCLNQ969V3 563 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ZUFSPQ96AP4 578 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ZNF653Q96CK0 615 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 SLC35A4Q96G79 324 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ARL5BQ96KC2 179 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 HIST1H2AHQ96KK5 128 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 ART5Q96L15 291 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 PLEKHG4BQ96PX9 1271 aa4.77□□□□□ -1.65
RTN4-213ENST00000485749 HIST1H2AJQ99878 128 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms