RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 RNASE9P60153 205 aaKnown RBP20.78■□□□□ 0.92
COL6A2-208ENST00000485591 TDGQ13569 410 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 TRNP1Q6NT89 227 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 TAC4Q86UU9 113 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 PLD4Q96BZ4 506 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 NPY6RQ99463 290 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 DDX23Q9BUQ8 820 aaKnown RBP20.78■□□□□ 0.92
COL6A2-208ENST00000485591 PARVAQ9NVD7 372 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 SORCS3Q9UPU3 1222 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 TICRRQ7Z2Z1 1910 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 E2F8A0AVK6 867 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 ANKRD62A6NC57 917 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 IRAK2O43187 625 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 MSI1O43347 362 aaKnown RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 STC2O76061 302 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 LCA5LO95447 670 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 GJB6O95452 261 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 TRUB2O95900 331 aaKnown RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 ABCB4P21439 1286 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 CYLC1P35663 651 aaPredicted RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 GALCP54803 685 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 PITX1P78337 314 aaPredicted RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 MAMLD1Q13495 774 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 GRM2Q14416 872 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 TRIP4Q15650 581 aaPredicted RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 YAF2Q8IY57 180 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 EMC1Q8N766 993 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 JOSD2Q8TAC2 188 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 NT5C3BQ969T7 300 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 TRMT61BQ9BVS5 477 aaKnown RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 THAP2Q9H0W7 228 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 THG1LQ9NWX6 298 aaKnown RBP20.77■□□□□ 0.92
COL6A2-208ENST00000485591 SH3BP1Q9Y3L3 701 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 SCINQ9Y6U3 715 aa20.77■□□□□ 0.92
COL6A2-208ENST00000485591 SOWAHDA6NJG2 315 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 C2CD4BA6NLJ0 364 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 ZNF263O14978 683 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 GREM1O60565 184 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 IGLV3-27P01718 113 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 IRF1P10914 325 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 RFC1P35251 1148 aaPredicted RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 RING1Q06587 406 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 EIF4EBP2Q13542 120 aaPredicted RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 SLC25A52Q3SY17 297 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 OTUD1Q5VV17 481 aaPredicted RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 CC2D1AQ6P1N0 951 aaPredicted RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 TTC16Q8NEE8 873 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 ADAM32Q8TC27 787 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 WBP2Q969T9 261 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 MCEEQ96PE7 176 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 FAM204AQ9H8W3 233 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 MRPL47Q9HD33 250 aaKnown RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 LSM7Q9UK45 103 aaKnown RBP20.76■□□□□ 0.91
COL6A2-208ENST00000485591 TLR6Q9Y2C9 796 aa20.76■□□□□ 0.91
COL6A2-208ENST00000485591 COL4A3Q01955 1670 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 CHADO15335 359 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 CYP1A2P05177 515 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 HMBSP08397 361 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 H2AFZP0C0S5 128 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 GBP1P32455 592 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 PTPN9P43378 593 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 SULT1E1P49888 294 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 TBX4P57082 545 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 GPC5P78333 572 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 C10orf76Q5T2E6 689 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 HTR3DQ70Z44 454 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 H2AFVQ71UI9 128 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 OSCP1Q8WVF1 389 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 RXFP2Q8WXD0 754 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 PGAP3Q96FM1 320 aaPredicted RBP20.75■□□□□ 0.91
COL6A2-208ENST00000485591 SLC39A13Q96H72 371 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 PACSIN1Q9BY11 444 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 DCLK3Q9C098 648 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 TMEM51Q9NW97 253 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 DDIT4Q9NX09 232 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 MYO1AQ9UBC5 1043 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 DUSP12Q9UNI6 340 aa20.75■□□□□ 0.91
COL6A2-208ENST00000485591 EIF3CLB5ME19 914 aaKnown RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 M0QYT0 321 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 SLC9A3R1O14745 358 aaPredicted RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 NDUFA10O95299 355 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 TMEM253P0C7T8 217 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 SRFP11831 508 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 PDGFRAP16234 1089 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 GPD1P21695 349 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 GDI1P31150 447 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 SDC4P31431 198 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 RPL7AP62424 266 aaKnown RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 NUGGCQ68CJ6 796 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 DCUN1D2Q6PH85 259 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 RAD9BQ6WBX8 426 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 Q6ZNB5 142 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 BNIPLQ7Z465 357 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 CTNNBL1Q8WYA6 563 aaPredicted RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 ASIC4Q96FT7 647 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 PDLIM2Q96JY6 352 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 FCRL2Q96LA5 508 aaPredicted RBP20.74■□□□□ 0.91
COL6A2-208ENST00000485591 CFAP57Q96MR6 1250 aa20.74■□□□□ 0.91
COL6A2-208ENST00000485591 TBCBQ99426 244 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms