RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 EPS8L1Q8TE68 723 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 SLC20A1Q8WUM9 679 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 ERGIC2Q96RQ1 377 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 C2orf42Q9NWW7 574 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 NAALADL1Q9UQQ1 740 aa16.96■□□□□ 0.31
DDR1-246ENST00000485023 ARIH1Q9Y4X5 557 aaPredicted RBP16.96■□□□□ 0.31
DDR1-246ENST00000485023 ANTXRLA6NF34 631 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 CAPN9O14815 690 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 GRAP2O75791 330 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 SERPINC1P01008 464 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 ERBB2P04626 1255 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 FYNP06241 537 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 MMEP08473 750 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 DRD1P21728 446 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 SOX5P35711 763 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 TPM4P67936 248 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 PTPN20Q4JDL3 420 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 OR6B2Q6IFH4 312 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 FAM183BPQ6ZVS7 135 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 TMEM110Q86TL2 294 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 ALYREFQ86V81 257 aaKnown RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 EXOC4Q96A65 974 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 BBS2Q9BXC9 721 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 LHX5Q9H2C1 402 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 POLR3BQ9NW08 1133 aaPredicted RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 PLK2Q9NYY3 685 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 AGO1Q9UL18 857 aaKnown RBP16.95■□□□□ 0.3
DDR1-246ENST00000485023 PIEZO1Q92508 2521 aa16.95■□□□□ 0.3
DDR1-246ENST00000485023 TRIM24O15164 1050 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 SP9P0CG40 484 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 HOXC13P31276 330 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 STAT1P42224 750 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 C2CD6Q53TS8 623 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 SYPL2Q5VXT5 272 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 MSANTD2Q6P1R3 559 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 CACNA2D4Q7Z3S7 1137 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 TMEM35BQ8NCS4 154 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 DQX1Q8TE96 717 aaKnown RBP16.94■□□□□ 0.3
DDR1-246ENST00000485023 DDX1Q92499 740 aaKnown RBP16.94■□□□□ 0.3
DDR1-246ENST00000485023 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
DDR1-246ENST00000485023 PNKPQ96T60 521 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 DCLK3Q9C098 648 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 ARHGEF4Q9NR80 690 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
DDR1-246ENST00000485023 R4GN57 208 aa16.94■□□□□ 0.3
DDR1-246ENST00000485023 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 HOXC11O43248 304 aaPredicted RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 TULP3O75386 442 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 TYRP14679 529 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 HARS2P49590 506 aaKnown RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 TRIP4Q15650 581 aaPredicted RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 NAA35Q5VZE5 725 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 TAC4Q86UU9 113 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 RPLP0P6Q8NHW5 317 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 P2RY11Q96G91 374 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 IRF2BPLQ9H1B7 796 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 POPDC2Q9HBU9 364 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 ZDHHC4Q9NPG8 344 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 PRMT8Q9NR22 394 aaPredicted RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 DNAJC17Q9NVM6 304 aaKnown RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
DDR1-246ENST00000485023 F5P12259 2224 aa16.93■□□□□ 0.3
DDR1-246ENST00000485023 SYNJ2BP-COX16A0A087WUM0 186 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 A0A1B0GTH6 734 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 TSPAN3O60637 253 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 KAT7O95251 611 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 APODP05090 189 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 CXCL12P48061 93 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 CCR3P51677 355 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 TBX4P57082 545 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 YWHAZP63104 245 aaKnown RBP16.92■□□□□ 0.3
DDR1-246ENST00000485023 PITX1P78337 314 aaPredicted RBP16.92■□□□□ 0.3
DDR1-246ENST00000485023 C2orf27AQ580R0 203 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 OLFML1Q6UWY5 402 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 SYNPOQ8N3V7 929 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 SPEM1Q8N4L4 309 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 CPA5Q8WXQ8 436 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 IER2Q9BTL4 223 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 FAM204AQ9H8W3 233 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 COX16Q9P0S2 106 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 DEC1Q9P2X7 70 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 FBXO4Q9UKT5 387 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 ZNF510Q9Y2H8 683 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 DAAM1Q9Y4D1 1078 aa16.92■□□□□ 0.3
DDR1-246ENST00000485023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.91■□□□□ 0.3
DDR1-246ENST00000485023 K7EQS6 105 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 MOCS2O96007 188 aaPredicted RBP16.91■□□□□ 0.3
DDR1-246ENST00000485023 CHRNB2P17787 502 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 NOMO3P69849 1222 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 FANCCQ00597 558 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 CDR2Q01850 454 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
DDR1-246ENST00000485023 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms