RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF687Q8N1G0 1237 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 WBP2Q969T9 261 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 CLDN23Q96B33 292 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 SERPINB11Q96P15 392 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 IER2Q9BTL4 223 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 TTYH3Q9C0H2 523 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 NUCKS1Q9H1E3 243 aaKnown RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 SPHK2Q9NRA0 654 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 TJP2Q9UDY2 1190 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 MTF2Q9Y483 593 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 KIF26AQ9ULI4 1882 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 COL4A2P08572 1712 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 LRRC53A6NM62 1247 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 LATS1O95835 1130 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 DCNP07585 359 aaKnown RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 ADH5P11766 374 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 CORO1AP31146 461 aaKnown RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 CHKAP35790 457 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 RING1Q06587 406 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 PON2Q15165 354 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 ASIC2Q16515 512 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 LY6G5CQ5SRR4 150 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 SFMBT2Q5VUG0 894 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 NAA35Q5VZE5 725 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 NUGGCQ68CJ6 796 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 IRF2BP2Q7Z5L9 587 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 UNC45BQ8IWX7 931 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 SYNPOQ8N3V7 929 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 DQX1Q8TE96 717 aaKnown RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 CPA5Q8WXQ8 436 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 CD101Q93033 1021 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 AGPAT1Q99943 283 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 P2RY13Q9BPV8 354 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 AIPL1Q9NZN9 384 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 DLGAP2Q9P1A6 1054 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 NAALADL1Q9UQQ1 740 aa17.31■□□□□ 0.36
HMGN1-214ENST00000482733 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
HMGN1-214ENST00000482733 ITIH6Q6UXX5 1313 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 HOXC11O43248 304 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 KLKB1P03952 638 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 CHRNB1P11230 501 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 DRD1P21728 446 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 EIF2DP41214 584 aaKnown RBP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 TBX4P57082 545 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 CDK17Q00537 523 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 PREPLQ4J6C6 727 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 TMEM196Q5HYL7 178 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 PPP1R2P3Q6NXS1 205 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 DENND1CQ8IV53 801 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 DTWD2Q8NBA8 298 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 CHFRQ96EP1 664 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 SLC2A13Q96QE2 648 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 RRN3Q9NYV6 651 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 MARK1Q9P0L2 795 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 WDR35Q9P2L0 1181 aa17.3■□□□□ 0.36
HMGN1-214ENST00000482733 AGO1Q9UL18 857 aaKnown RBP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.3■□□□□ 0.36
HMGN1-214ENST00000482733 TICRRQ7Z2Z1 1910 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 MSI1O43347 362 aaKnown RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 DAB1O75553 588 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 IGLV3-27P01718 113 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 UNGP13051 313 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 MMP8P22894 467 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 NSFP46459 744 aaKnown RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 GALK1P51570 392 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 CENPCQ03188 943 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 FZD5Q13467 585 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 TAF5Q15542 800 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 CLEC16AQ2KHT3 1053 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 ANO4Q32M45 955 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 DCAF6Q58WW2 860 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 SYPL2Q5VXT5 272 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 XYLT1Q86Y38 959 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 TMEM25Q86YD3 366 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 DEFB106AQ8N104 65 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 CPXM2Q8N436 756 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 AZIN2Q96A70 460 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 PIWIL1Q96J94 861 aaKnown RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 SEPT11Q9NVA2 429 aaKnown RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 TLR6Q9Y2C9 796 aa17.29■□□□□ 0.36
HMGN1-214ENST00000482733 ARIH1Q9Y4X5 557 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-214ENST00000482733 ZDBF2Q9HCK1 2354 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 TRUB2O95900 331 aaKnown RBP17.28■□□□□ 0.36
HMGN1-214ENST00000482733 COL9A1P20849 921 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 TNFAIP3P21580 790 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 GBP1P32455 592 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 NOS2P35228 1153 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 PRKCIP41743 596 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 SLC11A2P49281 568 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 CCINQ13939 588 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms