RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 TBCBQ99426 244 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 RAB6CQ9H0N0 254 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 EPHX3Q9H6B9 360 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 OLA1Q9NTK5 396 aaKnown RBP13.81□□□□□ -0.2
HDAC1-208ENST00000482310 ASNSD1Q9NWL6 643 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 GDE1Q9NZC3 331 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 TMEM59LQ9UK28 342 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 TCRBV5S1A1TA0A578 114 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 RCCD1A6NED2 376 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 M0QYT0 321 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ARHGAP6O43182 974 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 CYP1A2P05177 515 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ASGR2P07307 311 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 GLI1P08151 1106 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 PDGFRAP16234 1089 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 PSMA2P25787 234 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 SDC4P31431 198 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 NOS2P35228 1153 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 MATKP42679 507 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TUBP50607 506 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 GSCP56915 257 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ZXDBP98169 803 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 OGDHQ02218 1023 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 GRM2Q14416 872 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 SH3PXD2AQ5TCZ1 1133 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 DAB2IPQ5VWQ8 1189 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TANGO2Q6ICL3 276 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 PLEKHA7Q6IQ23 1121 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 FGF14Q92915 247 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 SMARCD2Q92925 531 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 RNF34Q969K3 372 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 SMOC2Q9H3U7 446 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 LUC7LQ9NQ29 371 aaKnown RBP13.8□□□□□ -0.2
HDAC1-208ENST00000482310 TDP1Q9NUW8 608 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 DDIT4Q9NX09 232 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 LIMD1Q9UGP4 676 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 ANAPC7Q9UJX3 599 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 STAP1Q9ULZ2 295 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 NUMBLQ9Y6R0 609 aa13.8□□□□□ -0.2
HDAC1-208ENST00000482310 C2CD4BA6NLJ0 364 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 HEPACAM2A8MVW5 462 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 LEFTY2O00292 366 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 CCP110O43303 1012 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 LCA5LO95447 670 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 OLFM2O95897 454 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 FCARP24071 287 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 SCNN1AP37088 669 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 NOP2P46087 812 aaKnown RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 NAP1L1P55209 391 aaKnown RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 SLC7A9P82251 487 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 PPP1R15BQ5SWA1 713 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 OTUD1Q5VV17 481 aaPredicted RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 MSANTD2Q6P1R3 559 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 ZFRQ96KR1 1074 aaKnown RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 PLA2G2FQ9BZM2 168 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 ZFP14Q9HCL3 533 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
HDAC1-208ENST00000482310 CALCOCO1Q9P1Z2 691 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 SH3BP1Q9Y3L3 701 aa13.79□□□□□ -0.2
HDAC1-208ENST00000482310 IRAK2O43187 625 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 BUB1O43683 1085 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
HDAC1-208ENST00000482310 VAV2P52735 878 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 TBX4P57082 545 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 KRT83P78385 493 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 ZNF252P-AS1Q0IIN9 211 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
HDAC1-208ENST00000482310 C10orf76Q5T2E6 689 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 VITQ6UXI7 678 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 ZFYVE19Q96K21 471 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 LRRC3BQ96PB8 259 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 NPY6RQ99463 290 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 DDX23Q9BUQ8 820 aaKnown RBP13.78□□□□□ -0.2
HDAC1-208ENST00000482310 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
HDAC1-208ENST00000482310 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
HDAC1-208ENST00000482310 ARHGAP26Q9UNA1 814 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms