RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 A0A1W2PQ45 241 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 A0A1W2PQY0 241 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 I6L893 689 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 DPYSL4O14531 572 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 XPO1O14980 1071 aaKnown RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 TMEM63AO94886 807 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 SLC10A2Q12908 348 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 ACAP1Q15027 740 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 RNASEH2BQ5TBB1 312 aaKnown RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 ARHGEF18Q6ZSZ5 1173 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 FAM35AQ86V20 835 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 ANKRD42Q8N9B4 389 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.01□□□□□ -0.01
CHD3-211ENST00000481999 STK32AQ8WU08 396 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 RSAD2Q8WXG1 361 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 PLCD4Q9BRC7 762 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 FGFR1OP2Q9NVK5 253 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 NKIRAS1Q9NYS0 192 aa15.01□□□□□ -0.01
CHD3-211ENST00000481999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHD3-211ENST00000481999 SUN1O94901 812 aa15□□□□□ -0.01
CHD3-211ENST00000481999 FYNP06241 537 aa15□□□□□ -0.01
CHD3-211ENST00000481999 GOT1P17174 413 aa15□□□□□ -0.01
CHD3-211ENST00000481999 MAGEA4P43358 317 aa15□□□□□ -0.01
CHD3-211ENST00000481999 SULT1E1P49888 294 aa15□□□□□ -0.01
CHD3-211ENST00000481999 SF3A3Q12874 501 aaKnown RBP eCLIP15□□□□□ -0.01
CHD3-211ENST00000481999 MRPL10Q7Z7H8 261 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 RPAINQ86UA6 219 aa15□□□□□ -0.01
CHD3-211ENST00000481999 TP53INP2Q8IXH6 220 aa15□□□□□ -0.01
CHD3-211ENST00000481999 CPT1BQ92523 772 aa15□□□□□ -0.01
CHD3-211ENST00000481999 EDEM1Q92611 657 aa15□□□□□ -0.01
CHD3-211ENST00000481999 WDR83Q9BRX9 315 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 DDHD2O94830 711 aa15□□□□□ -0.01
CHD3-211ENST00000481999 BDNFP23560 247 aa15□□□□□ -0.01
CHD3-211ENST00000481999 L1CAMP32004 1257 aa15□□□□□ -0.01
CHD3-211ENST00000481999 RPL34P49207 117 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 BASP1P80723 227 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 MRPS5P82675 430 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 PTK7Q13308 1070 aa15□□□□□ -0.01
CHD3-211ENST00000481999 FNBP1LQ5T0N5 605 aa15□□□□□ -0.01
CHD3-211ENST00000481999 NUGGCQ68CJ6 796 aa15□□□□□ -0.01
CHD3-211ENST00000481999 DARS2Q6PI48 645 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 PPP1R21Q6ZMI0 780 aa15□□□□□ -0.01
CHD3-211ENST00000481999 ZBED8Q8IZ13 594 aa15□□□□□ -0.01
CHD3-211ENST00000481999 CYP4X1Q8N118 509 aa15□□□□□ -0.01
CHD3-211ENST00000481999 ZNF296Q8WUU4 475 aaPredicted RBP15□□□□□ -0.01
CHD3-211ENST00000481999 PRCCQ92733 491 aaPredicted RBP15□□□□□ -0.01
CHD3-211ENST00000481999 KCTD15Q96SI1 283 aaPredicted RBP15□□□□□ -0.01
CHD3-211ENST00000481999 LRRC4Q9HBW1 653 aa15□□□□□ -0.01
CHD3-211ENST00000481999 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15□□□□□ -0.01
CHD3-211ENST00000481999 TPX2Q9ULW0 747 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 AP4E1Q9UPM8 1137 aa15□□□□□ -0.01
CHD3-211ENST00000481999 DRG1Q9Y295 367 aaKnown RBP15□□□□□ -0.01
CHD3-211ENST00000481999 H7C0C1 242 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 MCF2LO15068 1137 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 AVILO75366 819 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 FAM200BP0CF97 657 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 CYP2F1P24903 491 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 RBL1P28749 1068 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 STX2P32856 288 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 RDXP35241 583 aaKnown RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 ATP5OP48047 213 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 GATMP50440 423 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 NR1H3Q13133 447 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 MPP2Q14168 576 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 ECHDC2Q86YB7 292 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 GBP7Q8N8V2 638 aaPredicted RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 TTC25Q96NG3 672 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 PCDH9Q9HC56 1237 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 STARD7Q9NQZ5 370 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 PIGVQ9NUD9 493 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 DNAJB4Q9UDY4 337 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 CFAP73A6NFT4 308 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 M0QYT0 321 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 NDC80O14777 642 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 ZNF623O75123 536 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 AMPD1P23109 780 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 MATKP42679 507 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 PGFP49763 221 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 YWHAZP63104 245 aaKnown RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 NOMO1Q15155 1222 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 CLLU1OSQ5K130 101 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 SRRM1Q8IYB3 904 aaKnown RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 HACE1Q8IYU2 909 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 SIX6OS1Q8N1H7 587 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 CCDC63Q8NA47 563 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 MAGEC3Q8TD91 643 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 CENPIQ92674 756 aaPredicted RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 B3GALT6Q96L58 329 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 HSFY1Q96LI6 401 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 EURLQ9NYK6 297 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 EFR3BQ9Y2G0 817 aa14.99□□□□□ -0.01
CHD3-211ENST00000481999 PRG3Q9Y2Y8 225 aaPredicted RBP14.99□□□□□ -0.01
CHD3-211ENST00000481999 KCNN4O15554 427 aa14.98□□□□□ -0.01
CHD3-211ENST00000481999 MGRN1O60291 552 aa14.98□□□□□ -0.01
CHD3-211ENST00000481999 PBX3P40426 434 aa14.98□□□□□ -0.01
CHD3-211ENST00000481999 BOLA3Q53S33 107 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms