RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	KLF8	O95600	359 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	LTF	P02788	710 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	CHRM1	P11229	460 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	GRIA2	P42262	883 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	SASS6	Q6UVJ0	657 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	TOGARAM2	Q6ZUX3	1019 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	SYT13	Q7L8C5	426 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	PASD1	Q8IV76	773 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	SCML4	Q8N228	414 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	TXNDC5	Q8NBS9	432 aa	Known RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	ENOX1	Q8TC92	643 aa	Known RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	HSFY1	Q96LI6	401 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	VPS16	Q9H269	839 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	OLA1	Q9NTK5	396 aa	Known RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	DNAJC17	Q9NVM6	304 aa	Known RBP	13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	DEC1	Q9P2X7	70 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116	HCN2	Q9UL51	889 aa		13.46	□□□□□ -0.25
ABCF3-215	ENST00000481116		A0A0A0MRY4	1105 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM170A	A1A519	330 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	SGK1	O00141	431 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	MED7	O43513	233 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	HOXA6	P31267	233 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	CLCN1	P35523	988 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	TNFRSF4	P43489	277 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	KIR2DL1	P43626	348 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	KLK7	P49862	253 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	SIM2	Q14190	667 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	TRIP4	Q15650	581 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	C10orf76	Q5T2E6	689 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	GRAMD4	Q6IC98	578 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	TMEM92	Q6UXU6	159 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	KIAA2013	Q8IYS2	634 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	WDTC1	Q8N5D0	677 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	TERB1	Q8NA31	727 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	IL17RC	Q8NAC3	791 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	IRGQ	Q8WZA9	623 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	ACD	Q96AP0	544 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	PLD4	Q96BZ4	506 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	ERLEC1	Q96DZ1	483 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM81B	Q96LP2	452 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	XPO6	Q96QU8	1125 aa	Known RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	LSM14B	Q9BX40	385 aa	Known RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	DCLK3	Q9C098	648 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	PLCB1	Q9NQ66	1216 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	FANCL	Q9NW38	375 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	MARK1	Q9P0L2	795 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	TMEM63C	Q9P1W3	806 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	WDR35	Q9P2L0	1181 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	NCDN	Q9UBB6	729 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	INVS	Q9Y283	1065 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	ZNF510	Q9Y2H8	683 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	FHOD1	Q9Y613	1164 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	SDK1	Q7Z5N4	2213 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	PTPRZ1	P23471	2315 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	OTOGL	Q3ZCN5	2332 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	ABCA7	Q8IZY2	2146 aa		13.45	□□□□□ -0.26
ABCF3-215	ENST00000481116	NUP205	Q92621	2012 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	PRRT4	C9JH25	899 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116		E5RJQ4	531 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CACNG3	O60359	315 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	TSPAN3	O60637	253 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	FBXO21	O94952	628 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	MBD3	O95983	291 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	FYN	P06241	537 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CISD3	P0C7P0	127 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	NCAM1	P13591	858 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	EEF1G	P26641	437 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	WAS	P42768	502 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	RPL34	P49207	117 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	DGKE	P52429	567 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	MRPS21	P82921	87 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	RAPGEF1	Q13905	1077 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	DRAP1	Q14919	205 aa	Predicted RBP	13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	KRT31	Q15323	416 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CCDC183	Q5T5S1	534 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	KLHDC7A	Q5VTJ3	777 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CDKAL1	Q5VV42	579 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	FYB2	Q5VWT5	728 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	MSANTD2	Q6P1R3	559 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CEP68	Q76N32	757 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	SLC47A2	Q86VL8	602 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CAMKK1	Q8N5S9	505 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	RUBCN	Q92622	972 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM149B1	Q96BN6	582 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	SLC4A5	Q9BY07	1137 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	TPSD1	Q9BZJ3	242 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	CLEC4E	Q9ULY5	219 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	MMP17	Q9ULZ9	603 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	NAALADL1	Q9UQQ1	740 aa		13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	HBS1L	Q9Y450	684 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-215	ENST00000481116	GOLGA6L7	A0A1B0GV03	622 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	DCLK1	O15075	740 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	AXIN1	O15169	862 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	PAPSS1	O43252	624 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ADAM23	O75077	832 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	CHKA	P35790	457 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ACADSB	P45954	432 aa		13.43	□□□□□ -0.26

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