RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ANKRD20A12PQ8NF67 263 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 BHMTQ93088 406 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 SHDQ96IW2 340 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 PPP1R13BQ96KQ4 1090 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 RAB6CQ9H0N0 254 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 LHX5Q9H2C1 402 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 IFNKQ9P0W0 207 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 XPO7Q9UIA9 1087 aaKnown RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 AGO1Q9UL18 857 aaKnown RBP13.01□□□□□ -0.33
APTX-220ENST00000476858 CLEC4EQ9ULY5 219 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 F5P12259 2224 aa13.01□□□□□ -0.33
APTX-220ENST00000476858 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
APTX-220ENST00000476858 SERPINC1P01008 464 aa13□□□□□ -0.33
APTX-220ENST00000476858 CORO1AP31146 461 aaKnown RBP13□□□□□ -0.33
APTX-220ENST00000476858 CDH5P33151 784 aaPredicted RBP13□□□□□ -0.33
APTX-220ENST00000476858 SGSHP51688 502 aa13□□□□□ -0.33
APTX-220ENST00000476858 NOMO3P69849 1222 aa13□□□□□ -0.33
APTX-220ENST00000476858 KDSRQ06136 332 aa13□□□□□ -0.33
APTX-220ENST00000476858 MTAPQ13126 283 aa13□□□□□ -0.33
APTX-220ENST00000476858 CCINQ13939 588 aa13□□□□□ -0.33
APTX-220ENST00000476858 MEA1Q16626 185 aa13□□□□□ -0.33
APTX-220ENST00000476858 TMEM196Q5HYL7 178 aa13□□□□□ -0.33
APTX-220ENST00000476858 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
APTX-220ENST00000476858 TSSK4Q6SA08 328 aa13□□□□□ -0.33
APTX-220ENST00000476858 OLFML1Q6UWY5 402 aa13□□□□□ -0.33
APTX-220ENST00000476858 TPGS1Q6ZTW0 290 aa13□□□□□ -0.33
APTX-220ENST00000476858 IRF2BP2Q7Z5L9 587 aa13□□□□□ -0.33
APTX-220ENST00000476858 TAC4Q86UU9 113 aa13□□□□□ -0.33
APTX-220ENST00000476858 RALGPS2Q86X27 583 aaPredicted RBP13□□□□□ -0.33
APTX-220ENST00000476858 DENND1CQ8IV53 801 aa13□□□□□ -0.33
APTX-220ENST00000476858 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
APTX-220ENST00000476858 PHTF2Q8N3S3 785 aa13□□□□□ -0.33
APTX-220ENST00000476858 CPA6Q8N4T0 437 aa13□□□□□ -0.33
APTX-220ENST00000476858 IRGQQ8WZA9 623 aa13□□□□□ -0.33
APTX-220ENST00000476858 ATP2A3Q93084 1043 aa13□□□□□ -0.33
APTX-220ENST00000476858 FAM149B1Q96BN6 582 aa13□□□□□ -0.33
APTX-220ENST00000476858 SYT11Q9BT88 431 aa13□□□□□ -0.33
APTX-220ENST00000476858 TSPY26PQ9H489 355 aa13□□□□□ -0.33
APTX-220ENST00000476858 ABCC13Q9NSE7 274 aa13□□□□□ -0.33
APTX-220ENST00000476858 HCN2Q9UL51 889 aa13□□□□□ -0.33
APTX-220ENST00000476858 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 MAN2B1O00754 1011 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 FBXO21O94952 628 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 NCAM1P13591 858 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 STAT1P42224 750 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 CDR2Q01850 454 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 MMRN1Q13201 1228 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
APTX-220ENST00000476858 EMC10Q5UCC4 262 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 NADSYN1Q6IA69 706 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 OR6B2Q6IFH4 312 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
APTX-220ENST00000476858 XYLT1Q86Y38 959 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 ARHGAP18Q8N392 663 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 SPAG5Q96R06 1193 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
APTX-220ENST00000476858 SPHK2Q9NRA0 654 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 TAS2R14Q9NYV8 317 aa12.99□□□□□ -0.33
APTX-220ENST00000476858 KIAA1549LQ6ZVL6 1849 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 K7EQS6 105 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 TSPAN3O60637 253 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 NFATC1O95644 943 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 CYP1A1P04798 512 aaPredicted RBP12.98□□□□□ -0.33
APTX-220ENST00000476858 ADH5P11766 374 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 SKILP12757 684 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 SLC6A4P31645 630 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 ACADSBP45954 432 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 MLLT6P55198 1093 aaPredicted RBP12.98□□□□□ -0.33
APTX-220ENST00000476858 BPIFB4P59827 614 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 SATB1Q01826 763 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 DMWDQ09019 674 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 ANGPT1Q15389 498 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 MMS22LQ6ZRQ5 1243 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 ETFBKMTQ8IXQ9 262 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 RNF139Q8WU17 664 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 FCRL2Q96LA5 508 aaPredicted RBP12.98□□□□□ -0.33
APTX-220ENST00000476858 SLC2A13Q96QE2 648 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 P2RY13Q9BPV8 354 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 OSBPL6Q9BZF3 934 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 CHRDQ9H2X0 955 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
APTX-220ENST00000476858 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
APTX-220ENST00000476858 A0A1W2PQC6 194 aa12.97□□□□□ -0.33
APTX-220ENST00000476858 NEDD8-MDP1E9PL57 170 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms