RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MAP3K13O43283 966 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CALCAP01258 141 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 HMBSP08397 361 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 HOXB2P14652 356 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 NDUFV2P19404 249 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 NTSR1P30989 418 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 DGKGP49619 791 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PSEN1P49768 467 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 MXI1P50539 228 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SHC2P98077 582 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 FKBP3Q00688 224 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PDE4CQ08493 712 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 LRMPQ12912 555 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CUL2Q13617 745 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ENPP2Q13822 863 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 GSE1Q14687 1217 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 GEN1Q17RS7 908 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PKDCCQ504Y2 493 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 TRIM61Q5EBN2 209 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SPDYCQ5MJ68 293 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF658Q5TYW1 1059 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 TMEM215Q68D42 235 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ISM2Q6H9L7 571 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 LPCAT2Q7L5N7 544 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 C11orf74Q86VG3 221 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SYT12Q8IV01 421 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 DENND1CQ8IV53 801 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CHPFQ8IZ52 775 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PGBD3Q8N328 593 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 LMO3Q8TAP4 145 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 UBA3Q8TBC4 463 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 IPO4Q8TEX9 1081 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SORCS1Q8WY21 1168 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PIWIL1Q96J94 861 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 GSDMAQ96QA5 445 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 IMPG2Q9BZV3 1241 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 EVLQ9UI08 416 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 SLC27A6Q9Y2P4 619 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ATP6V1DQ9Y5K8 247 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 PTPRDP23468 1912 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ATG2BQ96BY7 2078 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SLC12A8A0AV02 714 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 YJEFN3A6XGL0 299 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 PPP1R3GB7ZBB8 358 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 E7ENQ6 273 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 O00370 1275 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SLC16A3O15427 465 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 ZBED1O96006 694 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 EPB41P11171 864 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 RALAP11233 206 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 ENGP17813 658 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SPINK2P20155 84 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 CORO1AP31146 461 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 IL12RB1P42701 662 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 NOVA1P51513 510 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 MFAP3P55082 362 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 YWHAGP61981 247 aaKnown RBP eCLIP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 COG7P83436 770 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 TRIP4Q15650 581 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 DCAF17Q5H9S7 520 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 PEAR1Q5VY43 1037 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 LYSMD4Q5XG99 296 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 FAM217AQ8IXS0 508 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 CCDC150Q8NCX0 1101 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 OR2I1PQ8NGU4 316 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SLC35F5Q8WV83 523 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 KAT5Q92993 513 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 XPO6Q96QU8 1125 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 ULBP1Q9BZM6 244 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 MARCH2Q9P0N8 246 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 THAP10Q9P2Z0 257 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 SFMBT1Q9UHJ3 866 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 RASAL2Q9UJF2 1139 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 LSM7Q9UK45 103 aaKnown RBP7.36□□□□□ -1.23
HDAC3-207ENST00000475549 TSPAN16Q9UKR8 245 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 STON1Q9Y6Q2 735 aa7.36□□□□□ -1.23
HDAC3-207ENST00000475549 USP24Q9UPU5 2620 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 KCNJ18B7U540 433 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 PIK3R2O00459 728 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 XPO1O14980 1071 aaKnown RBP7.35□□□□□ -1.23
HDAC3-207ENST00000475549 STX10O60499 249 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 PRKCHP24723 683 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 MAOBP27338 520 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 MAPK8P45983 427 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 SGSHP51688 502 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 FAM193AP78312 1265 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF33AQ06730 810 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 GOLGA8FQ08AF8 430 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 GOLGA8DPQ0D2H9 430 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 GOLGA7BQ2TAP0 167 aa7.35□□□□□ -1.23
HDAC3-207ENST00000475549 FUT11Q495W5 492 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms