RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 STRIP2Q9ULQ0 834 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 NENFQ9UMX5 172 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 NAALADL1Q9UQQ1 740 aa17.69■□□□□ 0.42
SCAF11-206ENST00000474828 PRR33A8MZF0 331 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.422e-14■■■□□ 17.3
SCAF11-206ENST00000474828 DAB1O75553 588 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 SERPING1P05155 500 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 ZNF75DP51815 510 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 TNK2Q07912 1038 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 GOLGA8FQ08AF8 430 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 GOLGA8DPQ0D2H9 430 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 KLHL30Q0D2K2 578 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 GAB4Q2WGN9 574 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 ACAD10Q6JQN1 1059 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 RSRC2Q7L4I2 434 aaKnown RBP17.68■□□□□ 0.42
SCAF11-206ENST00000474828 RALGPS2Q86X27 583 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-206ENST00000474828 MIB1Q86YT6 1006 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 PGAP3Q96FM1 320 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-206ENST00000474828 SHDQ96IW2 340 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 OSBPL6Q9BZF3 934 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 IRX2Q9BZI1 471 aaPredicted RBP17.68■□□□□ 0.42
SCAF11-206ENST00000474828 TRIM5Q9C035 493 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 ECT2Q9H8V3 914 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 HEBP1Q9NRV9 189 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 RRN3Q9NYV6 651 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 GTSE1Q9NYZ3 720 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 TLR6Q9Y2C9 796 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 ZNF510Q9Y2H8 683 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 WNT6Q9Y6F9 365 aa17.68■□□□□ 0.42
SCAF11-206ENST00000474828 NCAM1P13591 858 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 ARSAP15289 507 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 NOS2P35228 1153 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 MATKP42679 507 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 NSFP46459 744 aaKnown RBP17.67■□□□□ 0.42
SCAF11-206ENST00000474828 IFNAR2P48551 515 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 PPP1R15BQ5SWA1 713 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 TRIM68Q6AZZ1 485 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 OR6B2Q6IFH4 312 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 RHBDF2Q6PJF5 856 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 MMS22LQ6ZRQ5 1243 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 BBS7Q8IWZ6 715 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 DEFB106AQ8N104 65 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 SIX5Q8N196 739 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 OR8K1Q8NGG5 319 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 SERPINB11Q96P15 392 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 NPY6RQ99463 290 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 ISCUQ9H1K1 167 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 EBF3Q9H4W6 596 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 MARK1Q9P0L2 795 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 ARHGAP20Q9P2F6 1191 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 SFMBT1Q9UHJ3 866 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 RASAL2Q9UJF2 1139 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 SH3BP1Q9Y3L3 701 aa17.67■□□□□ 0.42
SCAF11-206ENST00000474828 TICRRQ7Z2Z1 1910 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 SLC12A8A0AV02 714 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 MAN2B1O00754 1011 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 IRAK2O43187 625 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 MFAP3LO75121 409 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 ENDOD1O94919 500 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 NFATC1O95644 943 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CALB1P05937 261 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 SKILP12757 684 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 TNFAIP3P21580 790 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CTHP32929 405 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CLCN5P51795 746 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CDK17Q00537 523 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 ASTE1Q2TB18 679 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 OTUD1Q5VV17 481 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 RNF43Q68DV7 783 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CWF19L1Q69YN2 538 aaKnown RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 MCOLN2Q8IZK6 566 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CPXM2Q8N436 756 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CPA6Q8N4T0 437 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 C3orf20Q8ND61 904 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CSGALNACT1Q8TDX6 532 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 CPLX3Q8WVH0 158 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 FCRL2Q96LA5 508 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 NELL2Q99435 816 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 ADAM22Q9P0K1 906 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 LSM7Q9UK45 103 aaKnown RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 FBXL21Q9UKT6 434 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 AGO1Q9UL18 857 aaKnown RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 ARIH1Q9Y4X5 557 aaPredicted RBP17.66■□□□□ 0.42
SCAF11-206ENST00000474828 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
SCAF11-206ENST00000474828 KANSL1LA0AUZ9 987 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 SPECC1L-ADORA2AF8WAN1 911 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 HOXC11O43248 304 aaPredicted RBP17.65■□□□□ 0.42
SCAF11-206ENST00000474828 TRUB2O95900 331 aaKnown RBP17.65■□□□□ 0.42
SCAF11-206ENST00000474828 CYP17A1P05093 508 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 GJA4P35212 333 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 PITX1P78337 314 aaPredicted RBP17.65■□□□□ 0.42
SCAF11-206ENST00000474828 FZD5Q13467 585 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 DHCR24Q15392 516 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 C2CD6Q53TS8 623 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 TRNP1Q6NT89 227 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 TAC4Q86UU9 113 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 ADAM33Q9BZ11 813 aa17.65■□□□□ 0.42
SCAF11-206ENST00000474828 ABHD10Q9NUJ1 306 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms