RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ZNF513Q8N8E2 541 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-209ENST00000474432 RLN3Q8WXF3 142 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 KCTD13Q8WZ19 329 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 KREMEN1Q96MU8 473 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 NT5C1BQ96P26 610 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 CDK5RAP1Q96SZ6 601 aaKnown RBP19.47■□□□□ 0.71
COL7A1-209ENST00000474432 PLK2Q9NYY3 685 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 AGO1Q9UL18 857 aaKnown RBP19.47■□□□□ 0.71
COL7A1-209ENST00000474432 KIAA1257Q9ULG3 409 aa19.47■□□□□ 0.71
COL7A1-209ENST00000474432 A0A1W2PQF6 199 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 BICDL2A1A5D9 508 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 BCLAF3A2AJT9 711 aaKnown RBP19.46■□□□□ 0.71
COL7A1-209ENST00000474432 YJEFN3A6XGL0 299 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 E7ENQ6 273 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 TM4SF5O14894 197 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 HMBSP08397 361 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 PAEPP09466 180 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 CORO1AP31146 461 aaKnown RBP19.46■□□□□ 0.71
COL7A1-209ENST00000474432 P2RY2P41231 377 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 ZNF132P52740 706 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 ADIGQ0VDE8 80 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 KCNH2Q12809 1159 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 PAK1Q13153 545 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 MAP7D1Q3KQU3 841 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 FAM217AQ8IXS0 508 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 EHBP1Q8NDI1 1231 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 SLC35F5Q8WV83 523 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 BHMTQ93088 406 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 XPO6Q96QU8 1125 aaKnown RBP19.46■□□□□ 0.71
COL7A1-209ENST00000474432 SRRTQ9BXP5 876 aaKnown RBP19.46■□□□□ 0.71
COL7A1-209ENST00000474432 MARCH2Q9P0N8 246 aa19.46■□□□□ 0.71
COL7A1-209ENST00000474432 MBD1Q9UIS9 605 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-209ENST00000474432 FOXD2O60548 495 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-209ENST00000474432 RHOBTB1O94844 696 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 SETSIPP0DME0 302 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 WASP42768 502 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 TRIP4Q15650 581 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-209ENST00000474432 ELF2Q15723 593 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 CNGA2Q16280 664 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 PREPLQ4J6C6 727 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-209ENST00000474432 TCEAL6Q6IPX3 200 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 PMF1Q6P1K2 205 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 RRAGAQ7L523 313 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 SCML4Q8N228 414 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 PPM1KQ8N3J5 372 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 TCEAL3Q969E4 200 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 LRRC4Q9HBW1 653 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 POLMQ9NP87 494 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-209ENST00000474432 HESX1Q9UBX0 185 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 CLEC4EQ9ULY5 219 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.45■□□□□ 0.7
COL7A1-209ENST00000474432 CNTN6Q9UQ52 1028 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 ZNF510Q9Y2H8 683 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 PCDHB4Q9Y5E5 795 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 GON4LQ3T8J9 2241 aa19.45■□□□□ 0.7
COL7A1-209ENST00000474432 TCRBV21S2A2A0A5A6 115 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 SLC12A8A0AV02 714 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 GFRA2O00451 464 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 ALDH1A2O94788 518 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 GABRG2P18507 467 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 BRD2P25440 801 aaKnown RBP19.44■□□□□ 0.7
COL7A1-209ENST00000474432 NTSR1P30989 418 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 GBP1P32455 592 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 DGKGP49619 791 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 LIMK1P53667 647 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 SLC8A3P57103 927 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 DAOAP59103 153 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 GCNT1Q02742 428 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 BSPRYQ5W0U4 402 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 DENND1CQ8IV53 801 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 HMGB4Q8WW32 186 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 EDEM1Q92611 657 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 DCLK3Q9C098 648 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 VPS45Q9NRW7 570 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 KIAA1468Q9P260 1216 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 SLC27A6Q9Y2P4 619 aa19.44■□□□□ 0.7
COL7A1-209ENST00000474432 LAMA1P25391 3075 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 CEP192Q8TEP8 1941 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 GNA14O95837 355 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 MFAP3P55082 362 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 UBE2HP62256 183 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 CREB5Q02930 508 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 KIAA1211LQ6NV74 962 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 RSRC2Q7L4I2 434 aaKnown RBP19.43■□□□□ 0.7
COL7A1-209ENST00000474432 C11orf74Q86VG3 221 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 IRF2BP1Q8IU81 584 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 CPXM2Q8N436 756 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 TRIML1Q8N9V2 468 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 RBBP8NLQ8NC74 664 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-209ENST00000474432 PIWIL1Q96J94 861 aaKnown RBP19.43■□□□□ 0.7
COL7A1-209ENST00000474432 GABRG3Q99928 467 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 CNGB3Q9NQW8 809 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 SFMBT1Q9UHJ3 866 aa19.43■□□□□ 0.7
COL7A1-209ENST00000474432 CAVIN2O95810 425 aa19.42■□□□□ 0.7
COL7A1-209ENST00000474432 AFPP02771 609 aaKnown RBP19.42■□□□□ 0.7
COL7A1-209ENST00000474432 HOXB2P14652 356 aa19.42■□□□□ 0.7
COL7A1-209ENST00000474432 CHKAP35790 457 aa19.42■□□□□ 0.7
COL7A1-209ENST00000474432 RGS7P49802 495 aa19.42■□□□□ 0.7
COL7A1-209ENST00000474432 CAMK4Q16566 473 aa19.42■□□□□ 0.7
COL7A1-209ENST00000474432 GEN1Q17RS7 908 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms