RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SFMBT2Q5VUG0 894 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 NAA35Q5VZE5 725 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 RHBDF2Q6PJF5 856 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 TXNDC11Q6PKC3 985 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 FAM183BPQ6ZVS7 135 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 SLC26A9Q7LBE3 791 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.15
SDC3-203ENST00000471567 CPA5Q8WXQ8 436 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 CLDN23Q96B33 292 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 AGPAT1Q99943 283 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 NAALADL1Q9UQQ1 740 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 MTF2Q9Y483 593 aaPredicted RBP15.96■□□□□ 0.15
SDC3-203ENST00000471567 ITIH6Q6UXX5 1313 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 LATS1O95835 1130 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 KLKB1P03952 638 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 HMBSP08397 361 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 UNGP13051 313 aaPredicted RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 CORO1AP31146 461 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 CHKAP35790 457 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 PRKCIP41743 596 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 RPS9P46781 194 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 HARS2P49590 506 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 GAD2Q05329 585 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 RING1Q06587 406 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 FZD5Q13467 585 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 ASIC2Q16515 512 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 LY6G5CQ5SRR4 150 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 DQX1Q8TE96 717 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 SYN2Q92777 582 aaPredicted RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 CHFRQ96EP1 664 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 PIWIL1Q96J94 861 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 SERPINB11Q96P15 392 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 SLC2A13Q96QE2 648 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 PCDHB18PQ96TA0 734 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 PRRX2Q99811 253 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 KCNH6Q9H252 994 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 SPHK2Q9NRA0 654 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 DLGAP2Q9P1A6 1054 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
SDC3-203ENST00000471567 NDRG2Q9UN36 371 aaKnown RBP15.95■□□□□ 0.14
SDC3-203ENST00000471567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.95■□□□□ 0.14
SDC3-203ENST00000471567 HOXC11O43248 304 aaPredicted RBP15.94■□□□□ 0.14
SDC3-203ENST00000471567 IGLV3-27P01718 113 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 CHRNB1P11230 501 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 ADH5P11766 374 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 MMP8P22894 467 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 EIF2DP41214 584 aaKnown RBP15.94■□□□□ 0.14
SDC3-203ENST00000471567 ZBED6P86452 979 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 CENPCQ03188 943 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 GRSF1Q12849 480 aaKnown RBP eCLIP15.94■□□□□ 0.14
SDC3-203ENST00000471567 LRRC32Q14392 662 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 PON2Q15165 354 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 TAF5Q15542 800 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 CLEC16AQ2KHT3 1053 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 TMEM196Q5HYL7 178 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 DGKKQ5KSL6 1271 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 SYPL2Q5VXT5 272 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 NUGGCQ68CJ6 796 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 XYLT1Q86Y38 959 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 UNC45BQ8IWX7 931 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 DEFB106AQ8N104 65 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 AZIN2Q96A70 460 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 P2RY13Q9BPV8 354 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 SYT11Q9BT88 431 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 MARK1Q9P0L2 795 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 WDR35Q9P2L0 1181 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 AGO1Q9UL18 857 aaKnown RBP15.94■□□□□ 0.14
SDC3-203ENST00000471567 TLR6Q9Y2C9 796 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 COL4A3Q01955 1670 aa15.94■□□□□ 0.14
SDC3-203ENST00000471567 ZNF318Q5VUA4 2279 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 MSI1O43347 362 aaKnown RBP15.93■□□□□ 0.14
SDC3-203ENST00000471567 DAB1O75553 588 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 IGLV3-25P01717 112 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 DCNP07585 359 aaKnown RBP15.93■□□□□ 0.14
SDC3-203ENST00000471567 TNFAIP3P21580 790 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 DRD1P21728 446 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 NOS2P35228 1153 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 NSFP46459 744 aaKnown RBP15.93■□□□□ 0.14
SDC3-203ENST00000471567 GALK1P51570 392 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 TBX4P57082 545 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 CDK17Q00537 523 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 GAB4Q2WGN9 574 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 DCAF6Q58WW2 860 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 PPP1R2P3Q6NXS1 205 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 ARCQ7LC44 396 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 TAC4Q86UU9 113 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 TMEM25Q86YD3 366 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 PHF13Q86YI8 300 aaPredicted RBP15.93■□□□□ 0.14
SDC3-203ENST00000471567 DENND1CQ8IV53 801 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 FAM217AQ8IXS0 508 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 SYNPOQ8N3V7 929 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 CPXM2Q8N436 756 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 CD101Q93033 1021 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 IER2Q9BTL4 223 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 LMAN1LQ9HAT1 526 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 TMEM51Q9NW97 253 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms