RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CTNNA2P26232 953 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 IL1R2P27930 398 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 MIPP30301 263 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 SULT1E1P49888 294 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 ATXN1P54253 815 aaKnown RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 SLC25A11Q02978 314 aaKnown RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 DLX2Q07687 328 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 NNTQ13423 1086 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 PEX26Q7Z412 305 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 ADAM32Q8TC27 787 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 C16orf45Q96MC5 204 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 SLC22A12Q96S37 553 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 PEBP4Q96S96 227 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 CDK5RAP1Q96SZ6 601 aaKnown RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 CDX2Q99626 313 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-202ENST00000463060 PIGVQ9NUD9 493 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 TMEM51Q9NW97 253 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 SFMBT1Q9UHJ3 866 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 AMFRQ9UKV5 643 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 PCDHA3Q9Y5H8 950 aa14.95□□□□□ -0.02
COL6A1-202ENST00000463060 C2orf16Q68DN1 1984 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 A0A1W2PRU2 124 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 MDM4O15151 490 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 IGLV3-27P01718 113 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 GJA1P17302 382 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 IGFBP4P22692 258 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 RDXP35241 583 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 CYP4F8P98187 520 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 TRIP4Q15650 581 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 CDO1Q16878 200 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 C10orf120Q5SQS8 335 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 RARS2Q5T160 578 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ARTNQ5T4W7 220 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 PAPD7Q5XG87 772 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 TXNDC8Q6A555 127 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 TXNRD3NBQ6F5E7 133 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 SYT10Q6XYQ8 523 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 PDZD4Q76G19 769 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 Q7L0L9 218 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 MRPS31Q92665 395 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ALG3Q92685 438 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 KRT35Q92764 455 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 PABPC5Q96DU9 382 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 GUCD1Q96NT3 240 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 CYP2S1Q96SQ9 504 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 GAS2L1Q99501 681 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 KLF16Q9BXK1 252 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 SLC46A2Q9BY10 475 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ADAM7Q9H2U9 754 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ATXN3LQ9H3M9 355 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 ANLNQ9NQW6 1124 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 DDIT4Q9NX09 232 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 MARCH2Q9P0N8 246 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 DNMT3LQ9UJW3 386 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 USP18Q9UMW8 372 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 PACSIN2Q9UNF0 486 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-202ENST00000463060 USTQ9Y2C2 406 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 TLR6Q9Y2C9 796 aa14.94□□□□□ -0.02
COL6A1-202ENST00000463060 KCNU1A8MYU2 1149 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 MIF4GDA9UHW6 222 aaKnown RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 KIF2AO00139 706 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ZNF197O14709 1029 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 SPOPO43791 374 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ATP1A1P05023 1023 aaKnown RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 SRGAP2BP0DMP2 458 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 DDX6P26196 483 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 GBP1P32455 592 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ADRA1BP35368 520 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 MARCKSL1P49006 195 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 SLC7A9P82251 487 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ITIH3Q06033 890 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 RING1Q06587 406 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 EFEMP1Q12805 493 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 BOLA3Q53S33 107 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 RSRC2Q7L4I2 434 aaKnown RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 POLNQ7Z5Q5 900 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 TADA2BQ86TJ2 420 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 RHOT1Q8IXI2 618 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 FAM71BQ8TC56 605 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ADAMTS19Q8TE59 1207 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 MYLIPQ8WY64 445 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 NTAN1Q96AB6 310 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 FCRL2Q96LA5 508 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 SERPINB11Q96P15 392 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 ARHGEF38Q9NXL2 777 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 DNAI1Q9UI46 699 aa14.93□□□□□ -0.02
COL6A1-202ENST00000463060 HBS1LQ9Y450 684 aaKnown RBP14.93□□□□□ -0.02
COL6A1-202ENST00000463060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-202ENST00000463060 CCDC66A2RUB6 948 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 ENC1O14682 589 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 MSI1O43347 362 aaKnown RBP14.92□□□□□ -0.02
COL6A1-202ENST00000463060 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 GREM1O60565 184 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 TNNT1P13805 278 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms