RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ZNF334Q9HCZ1 680 aaPredicted RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 METTL5Q9NRN9 209 aaKnown RBP11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TDP1Q9NUW8 608 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 HCFC1R1Q9NWW0 138 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 DONSONQ9NYP3 566 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TAS2R14Q9NYV8 317 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TBC1D14Q9P2M4 693 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 ARHGAP26Q9UNA1 814 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TLR6Q9Y2C9 796 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 SH3BP1Q9Y3L3 701 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 TSC2P49815 1807 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
SMNDC1-203ENST00000460483 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 LATS1O95835 1130 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 OLFM2O95897 454 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 LAMP2P13473 410 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 PSMA2P25787 234 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 RDXP35241 583 aaKnown RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC1A1P43005 524 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC11A2P49281 568 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 AMPD2Q01433 879 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 DEUP1Q05D60 604 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 RING1Q06587 406 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ODF2Q5BJF6 829 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 BRMS1LQ5PSV4 323 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 TXNDC8Q6A555 127 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 RAD9BQ6WBX8 426 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF662Q6ZS27 426 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 SCD5Q86SK9 330 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 TMEM139Q8IV31 216 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF454Q8N9F8 522 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ZSCAN18Q8TBC5 510 aaPredicted RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF564Q8TBZ8 553 aaPredicted RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 DEPDC1BQ8WUY9 529 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 EDEM1Q92611 657 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 OTUB2Q96DC9 234 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 PGAP3Q96FM1 320 aaPredicted RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ALS2CR12Q96Q35 445 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 DDX23Q9BUQ8 820 aaKnown RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 TRPV4Q9HBA0 871 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 DDIT4Q9NX09 232 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 IGSF9Q9P2J2 1179 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 EPS15L1Q9UBC2 864 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 RASAL2Q9UJF2 1139 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 ANAPC7Q9UJX3 599 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 TMEM59LQ9UK28 342 aa11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
SMNDC1-203ENST00000460483 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 E2F8A0AVK6 867 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TYW5A2RUC4 315 aaKnown RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TMEM191CA6NGB0 347 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 C2CD4BA6NLJ0 364 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 M0QYT0 321 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 COCHO43405 550 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TRUB2O95900 331 aaKnown RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TCF3P15923 654 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 CHKAP35790 457 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 SULT1E1P49888 294 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF135P52742 658 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 HADHBP55084 474 aaKnown RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TBX4P57082 545 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 CYP4F8P98187 520 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 TRIP4Q15650 581 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ARID3BQ8IVW6 561 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ARL14EPQ8N8R7 260 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ZNF557Q8N988 423 aaPredicted RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC35G2Q8TBE7 412 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 DQX1Q8TE96 717 aaKnown RBP11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 RXFP2Q8WXD0 754 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 AZIN2Q96A70 460 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ELSPBP1Q96BH3 223 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC46A2Q9BY10 475 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 POMKQ9H5K3 350 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 WDCPQ9H6R7 721 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 CCSER2Q9H7U1 834 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
SMNDC1-203ENST00000460483 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PJA2O43164 708 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PRPSAP2O60256 369 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 ECI2O75521 394 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 GRAP2O75791 330 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 MTA2O94776 668 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 CEBPBP17676 345 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 MAN1A1P33908 653 aa11.47□□□□□ -0.57
SMNDC1-203ENST00000460483 PCK1P35558 622 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms