RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 KIAA1257Q9ULG3 409 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 TRIP11Q15643 1979 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 ALADP13716 330 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 NEK3P51956 506 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 NME3Q13232 169 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 OLIG2Q13516 323 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CCL15Q16663 113 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 TTC39BQ5VTQ0 682 aaPredicted RBP18.79■□□□□ 0.6
HPS3-202ENST00000460120 ADAM32Q8TC27 787 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
HPS3-202ENST00000460120 GCOM2Q9BZD3 368 aaPredicted RBP18.79■□□□□ 0.6
HPS3-202ENST00000460120 ARL8BQ9NVJ2 186 aa18.79■□□□□ 0.6
HPS3-202ENST00000460120 CYP2C9P11712 490 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 YY1P25490 414 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 TKTP29401 623 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 GMPRP36959 345 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 DCAF6Q58WW2 860 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 CES3Q6UWW8 571 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 TP53INP2Q8IXH6 220 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 CCNYQ8ND76 341 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 FAM13CQ8NE31 585 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 MAGEC3Q8TD91 643 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 CSPG4P5Q96PW8 444 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 LRMDAQ9H2I8 198 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 WDR27A2RRH5 827 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 ENTPD5O75356 428 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 AP1B1Q10567 949 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 DGKDQ16760 1214 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 HEATR6Q6AI08 1181 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 ALYREFQ86V81 257 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 DEPDC1BQ8WUY9 529 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 KBTBD7Q8WVZ9 684 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 ALKBH8Q96BT7 664 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 VPS11Q9H270 941 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 ADAMTS10Q9H324 1103 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 SSU72Q9NP77 194 aaKnown RBP18.78■□□□□ 0.6
HPS3-202ENST00000460120 FETUBQ9UGM5 382 aa18.78■□□□□ 0.6
HPS3-202ENST00000460120 KRT37O76014 449 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 MYL2P10916 166 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 GM2AP17900 193 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 ETV4P43268 484 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 NDUFV1P49821 464 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 SULT1E1P49888 294 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 TMPRSS15P98073 1019 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 SOX4Q06945 474 aaPredicted RBP18.77■□□□□ 0.6
HPS3-202ENST00000460120 ADIGQ0VDE8 80 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 HIC1Q14526 733 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 KYAT1Q16773 422 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 DCAF4L1Q3SXM0 396 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 FBXO47Q5MNV8 452 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 RFWD3Q6PCD5 774 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 RFX8Q6ZV50 586 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 GPR142Q7Z601 462 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 NDUFAF2Q8N183 169 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 NME8Q8N427 588 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 ZNF670Q9BS34 389 aa18.77■□□□□ 0.6
HPS3-202ENST00000460120 NOP53Q9NZM5 478 aaKnown RBP18.77■□□□□ 0.6
HPS3-202ENST00000460120 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 BCLAF3A2AJT9 711 aaKnown RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 C2CD2LO14523 706 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 DPYSL4O14531 572 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 APOEP02649 317 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 SNRPAP09012 282 aaKnown RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 VAV1P15498 845 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 BST2Q10589 180 aaKnown RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 SLC45A4Q5BKX6 768 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 NOTUMQ6P988 496 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 ZNF534Q76KX8 674 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 CDKL3Q8IVW4 592 aaPredicted RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 DEFB106AQ8N104 65 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 NCAPGQ9BPX3 1015 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 MTMR10Q9NXD2 777 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 DTLQ9NZJ0 730 aa18.77■□□□□ 0.59
HPS3-202ENST00000460120 MRPL42Q9Y6G3 142 aaKnown RBP18.77■□□□□ 0.59
HPS3-202ENST00000460120 BRCA2P51587 3418 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 KPNA7A9QM74 516 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 SMAPO00193 183 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 BEST1O76090 585 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 HAUS5O94927 633 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 SMIM10L2AP0DMW4 78 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 SMIM10L2BP0DMW5 78 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 SKIV2L2P42285 1042 aaKnown RBP18.76■□□□□ 0.59
HPS3-202ENST00000460120 CLNS1AP54105 237 aaKnown RBP18.76■□□□□ 0.59
HPS3-202ENST00000460120 SESN3P58005 492 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 MRPS5P82675 430 aaKnown RBP18.76■□□□□ 0.59
HPS3-202ENST00000460120 STILQ15468 1287 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 CHI3L2Q15782 390 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 CES4AQ5XG92 561 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 C16orf46Q6P387 395 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
HPS3-202ENST00000460120 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 MAML3Q96JK9 1138 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 PHACTR1Q9C0D0 580 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 C15orf41Q9Y2V0 281 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 GPR32O75388 356 aa18.76■□□□□ 0.59
HPS3-202ENST00000460120 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms