RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FAM172AQ8WUF8 416 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 CD101Q93033 1021 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 NTAN1Q96AB6 310 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 RIPOR3Q96MK2 946 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 ALS2CR12Q96Q35 445 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 TBCBQ99426 244 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 ATXN3LQ9H3M9 355 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 CCSER2Q9H7U1 834 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 CALCOCO1Q9P1Z2 691 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 TLR6Q9Y2C9 796 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 PAXBP1Q9Y5B6 917 aa11.73□□□□□ -0.53
TRAF4-206ENST00000454852 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 C2orf78A6NCI8 922 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 M0QYT0 321 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 PALMO75781 387 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 RNF8O76064 485 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 SLC2A3P11169 496 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 TFE3P19532 575 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 COMTP21964 271 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 NTHL1P78549 312 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 COG7P83436 770 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 SLC25A11Q02978 314 aaKnown RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 SCAPQ12770 1279 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 MESDQ14696 234 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 C15orf59Q2T9L4 293 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 BRMS1LQ5PSV4 323 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 C10orf120Q5SQS8 335 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 DAAM2Q86T65 1068 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 NT5DC3Q86UY8 548 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 AZIN2Q96A70 460 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 TCEAL4Q96EI5 215 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 KLF16Q9BXK1 252 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 SLC46A2Q9BY10 475 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 ARHGEF38Q9NXL2 777 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 MARCH2Q9P0N8 246 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 ARHGAP26Q9UNA1 814 aa11.72□□□□□ -0.53
TRAF4-206ENST00000454852 MRPS23Q9Y3D9 190 aaKnown RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 ZFP37Q9Y6Q3 630 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-206ENST00000454852 DOCK6Q96HP0 2047 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 HELZP42694 1942 aaKnown RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 KCNU1A8MYU2 1149 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 MIF4GDA9UHW6 222 aaKnown RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 KIF2AO00139 706 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 MDM4O15151 490 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 PSTPIP1O43586 416 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 ZNF500O60304 480 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 LATS1O95835 1130 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 TBX18O95935 607 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 HDCP19113 662 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 FSHRP23945 695 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CTNNA2P26232 953 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 MIPP30301 263 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 NAP1L1P55209 391 aaKnown RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CYP4F8P98187 520 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 DEUP1Q05D60 604 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 TEAD2Q15562 447 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 BOLA3Q53S33 107 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 SH3PXD2AQ5TCZ1 1133 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 TXNDC8Q6A555 127 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CYP4V2Q6ZWL3 525 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CMTM8Q8IZV2 173 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 TEKT4Q8WW24 435 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 PLD4Q96BZ4 506 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 HES6Q96HZ4 224 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 FCRL2Q96LA5 508 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 SLC22A12Q96S37 553 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 TRPV4Q9HBA0 871 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 PIGVQ9NUD9 493 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 DDIT4Q9NX09 232 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRAF4-206ENST00000454852 CD207Q9UJ71 328 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
TRAF4-206ENST00000454852 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
TRAF4-206ENST00000454852 CCDC66A2RUB6 948 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 GREM1O60565 184 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 KRT7P08729 469 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 CEBPBP17676 345 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 CCR1P32246 355 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 CTNNA1P35221 906 aaKnown RBP11.7□□□□□ -0.54
TRAF4-206ENST00000454852 TBX4P57082 545 aa11.7□□□□□ -0.54
TRAF4-206ENST00000454852 ATP11AP98196 1134 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms