RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 KLKB1P03952 638 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 HMBSP08397 361 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 SKILP12757 684 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 NSFP46459 744 aaKnown RBP29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 KPNA1P52294 538 aaPredicted RBP29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 MMS22LQ6ZRQ5 1243 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 CPA6Q8N4T0 437 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 PLD4Q96BZ4 506 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 MSANTD3Q96H12 275 aa29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 BZW2Q9Y6E2 419 aaKnown RBP29.21■■■□□ 2.27
SMARCC1-203ENST00000454240 GRAP2O75791 330 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 SOX9P48436 509 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 RALGPS2Q86X27 583 aaPredicted RBP29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 DEFB106AQ8N104 65 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 DCLK3Q9C098 648 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 MFSD1Q9H3U5 465 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 TBC1D17Q9HA65 648 aa29.2■■■□□ 2.26
SMARCC1-203ENST00000454240 F5P12259 2224 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 SPECC1L-ADORA2AF8WAN1 911 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 MAN2B1O00754 1011 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 MSI1O43347 362 aaKnown RBP29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 IGLV3-27P01718 113 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 HNRNPH3P31942 346 aaKnown RBP29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 CTHP32929 405 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 DCAF6Q58WW2 860 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 ACAD10Q6JQN1 1059 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 CHFRQ96EP1 664 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 C11orf70Q9BRQ4 267 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 ADAM22Q9P0K1 906 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 ZNF510Q9Y2H8 683 aa29.19■■■□□ 2.26
SMARCC1-203ENST00000454240 KANSL1LA0AUZ9 987 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 DAB1O75553 588 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 IGLV3-25P01717 112 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 SERPING1P05155 500 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 CD72P21854 359 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 CORO1AP31146 461 aaKnown RBP29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 GSCP56915 257 aaPredicted RBP29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 NR1H3Q13133 447 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 NNTQ13423 1086 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 ARID5BQ14865 1188 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 DHCR24Q15392 516 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 FAM102AQ5T9C2 384 aaPredicted RBP29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 CWF19L1Q69YN2 538 aaKnown RBP29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 C1orf228Q6PIY5 440 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 RHBDF2Q6PJF5 856 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 ZNF852Q6ZMS4 543 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 MON1BQ7L1V2 547 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 TAC4Q86UU9 113 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 FBXL6Q8N531 539 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 SERPINB11Q96P15 392 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 LRFN3Q9BTN0 628 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 MIA3Q5JRA6 1907 aa29.18■■■□□ 2.26
SMARCC1-203ENST00000454240 DDX3XO00571 662 aaKnown RBP eCLIP29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 CYP17A1P05093 508 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 GJA4P35212 333 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 NOS2P35228 1153 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 ZNF75DP51815 510 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 RING1Q06587 406 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 C1QBPQ07021 282 aaKnown RBP29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 TBX2Q13207 712 aaPredicted RBP29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 EIF4EBP2Q13542 120 aaPredicted RBP29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 FLCNQ8NFG4 579 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 TAS2R14Q9NYV8 317 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 WDR35Q9P2L0 1181 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 TMEM59LQ9UK28 342 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 AGO1Q9UL18 857 aaKnown RBP29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 TLR6Q9Y2C9 796 aa29.17■■■□□ 2.26
SMARCC1-203ENST00000454240 GOLGA8SH3BPF8 625 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 TRUB2O95900 331 aaKnown RBP29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 CALB1P05937 261 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 GZMAP12544 262 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 MATKP42679 507 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 HARS2P49590 506 aaKnown RBP29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 CLCN5P51795 746 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 TBX4P57082 545 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 PITX1P78337 314 aaPredicted RBP29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 PPP1R2P3Q6NXS1 205 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 TXNDC11Q6PKC3 985 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 ARCQ7LC44 396 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 DENND1CQ8IV53 801 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 DRC7Q8IY82 874 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 OR8K1Q8NGG5 319 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 ADAM32Q8TC27 787 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 FAM3CQ92520 227 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 SLC39A13Q96H72 371 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 MRFAP1L1Q96HT8 127 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 DNAJC7Q99615 494 aa29.16■■■□□ 2.26
SMARCC1-203ENST00000454240 STK25O00506 426 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 IRAK2O43187 625 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 TPM1P09493 284 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 RNASE9P60153 205 aaKnown RBP29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 CDK17Q00537 523 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 AMPD2Q01433 879 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 GAB4Q2WGN9 574 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 TDRD12Q587J7 1177 aaKnown RBP29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 LY6G5CQ5SRR4 150 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 TMC6Q7Z403 805 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 ZNF687Q8N1G0 1237 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 FCRL2Q96LA5 508 aaPredicted RBP29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 NELL2Q99435 816 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms