RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 PLD4Q96BZ4 506 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 PPP1R13BQ96KQ4 1090 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 CPXM1Q96SM3 734 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 PNKPQ96T60 521 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 BBS2Q9BXC9 721 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 LHX5Q9H2C1 402 aa26.11■■□□□ 1.77
UFD1-204ENST00000447868 HBS1LQ9Y450 684 aaKnown RBP26.11■■□□□ 1.77
UFD1-204ENST00000447868 NCAM1P13591 858 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 NBL1P41271 181 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 SEC13P55735 322 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 MESP2Q0VG99 397 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 PPP2R5DQ14738 602 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 ZNF528Q3MIS6 628 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 FBXO43Q4G163 708 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 MSANTD2Q6P1R3 559 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 NEK11Q8NG66 645 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 BHMTQ93088 406 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 NOX5Q96PH1 765 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 AGO1Q9UL18 857 aaKnown RBP26.1■■□□□ 1.77
UFD1-204ENST00000447868 CEP83Q9Y592 693 aa26.1■■□□□ 1.77
UFD1-204ENST00000447868 FAM170AA1A519 330 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 GFPT2O94808 682 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 FYNP06241 537 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 EIF2DP41214 584 aaKnown RBP26.09■■□□□ 1.77
UFD1-204ENST00000447868 TRIP4Q15650 581 aaPredicted RBP26.09■■□□□ 1.77
UFD1-204ENST00000447868 SFTPA1Q8IWL2 248 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 RPLP0P6Q8NHW5 317 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 ARHGEF4Q9NR80 690 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 NAALADL1Q9UQQ1 740 aa26.09■■□□□ 1.77
UFD1-204ENST00000447868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 K7EQS6 105 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 TULP3O75386 442 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 KAT7O95251 611 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 APODP05090 189 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 TYRP14679 529 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 HARS2P49590 506 aaKnown RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 IQCB1Q15051 598 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 SKOR2Q2VWA4 1001 aaPredicted RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 NOP9Q86U38 636 aaKnown RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 ETFBKMTQ8IXQ9 262 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 PIWIL1Q96J94 861 aaKnown RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 SPAG5Q96R06 1193 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 ERGIC2Q96RQ1 377 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 SYNCQ9H7C4 482 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 POLR3BQ9NW08 1133 aaPredicted RBP26.08■■□□□ 1.77
UFD1-204ENST00000447868 PLK2Q9NYY3 685 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 MARK1Q9P0L2 795 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 WDR35Q9P2L0 1181 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 KIAA1549LQ6ZVL6 1849 aa26.08■■□□□ 1.77
UFD1-204ENST00000447868 ANTXRLA6NF34 631 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 CAPN9O14815 690 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 ATG13O75143 517 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 SOX5P35711 763 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 JAM2P57087 298 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 ZSCAN23Q3MJ62 389 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 ALYREFQ86V81 257 aaKnown RBP26.07■■□□□ 1.76
UFD1-204ENST00000447868 CBX8Q9HC52 389 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 DEC1Q9P2X7 70 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 DAAM1Q9Y4D1 1078 aa26.07■■□□□ 1.76
UFD1-204ENST00000447868 TRIM24O15164 1050 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 TEX33O43247 280 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 ERBB2P04626 1255 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 TDGF1P13385 188 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 HOXC13P31276 330 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 CHKAP35790 457 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 GRIA2P42262 883 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 TAF5Q15542 800 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 C2orf27AQ580R0 203 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 SYPL2Q5VXT5 272 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 OR6B2Q6IFH4 312 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 ZC3H14Q6PJT7 736 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 FAM183BPQ6ZVS7 135 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 TMEM35BQ8NCS4 154 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 ADAM32Q8TC27 787 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 EPS8L1Q8TE68 723 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 DQX1Q8TE96 717 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 IPO4Q8TEX9 1081 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 DDX1Q92499 740 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 XPO6Q96QU8 1125 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 TRIM62Q9BVG3 475 aa26.06■■□□□ 1.76
UFD1-204ENST00000447868 DNAJC17Q9NVM6 304 aaKnown RBP26.06■■□□□ 1.76
UFD1-204ENST00000447868 CHURC1-FNTBB4DL54 471 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 MMEP08473 750 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 STAT1P42224 750 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 MRE11P49959 708 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 TBX4P57082 545 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 YWHAZP63104 245 aaKnown RBP26.05■■□□□ 1.76
UFD1-204ENST00000447868 PTPN20Q4JDL3 420 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 GRAMD4Q6IC98 578 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 LUZP1Q86V48 1076 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 PHTF2Q8N3S3 785 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 SLC20A1Q8WUM9 679 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 P2RY11Q96G91 374 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 POPDC2Q9HBU9 364 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 RTN4Q9NQC3 1192 aaKnown RBP26.05■■□□□ 1.76
UFD1-204ENST00000447868 ZSCAN32Q9NX65 697 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 SLC8A2Q9UPR5 921 aa26.05■■□□□ 1.76
UFD1-204ENST00000447868 FANCMQ8IYD8 2048 aa26.04■■□□□ 1.76
UFD1-204ENST00000447868 TBC1D3BA6NDS4 549 aa26.04■■□□□ 1.76
UFD1-204ENST00000447868 K7ESF4 209 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms