RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GAD2Q05329 585 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 TAF5Q15542 800 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 PTPN20Q4JDL3 420 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 MSANTD2Q6P1R3 559 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 TMEM110Q86TL2 294 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 DENND1CQ8IV53 801 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 EPS8L1Q8TE68 723 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 DDX1Q92499 740 aaKnown RBP15.5■□□□□ 0.07
HDAC4-204ENST00000446876 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 BHMTQ93088 406 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 PPP1R13BQ96KQ4 1090 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 PDCL3Q9H2J4 239 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 POLR3BQ9NW08 1133 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-204ENST00000446876 AGO1Q9UL18 857 aaKnown RBP15.5■□□□□ 0.07
HDAC4-204ENST00000446876 NAALADL1Q9UQQ1 740 aa15.5■□□□□ 0.07
HDAC4-204ENST00000446876 NEDD8-MDP1E9PL57 170 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 TRIM24O15164 1050 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 HOXC11O43248 304 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 MMEP08473 750 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 NCAM1P13591 858 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 DRD1P21728 446 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 SOX5P35711 763 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 SEC13P55735 322 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 SYPL2Q5VXT5 272 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 FAM183BPQ6ZVS7 135 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 ADAM32Q8TC27 787 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 DQX1Q8TE96 717 aaKnown RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 PLD4Q96BZ4 506 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 NAP1L5Q96NT1 182 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 SPAG5Q96R06 1193 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 PRMT8Q9NR22 394 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 PLK2Q9NYY3 685 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 NOCTQ9UK39 431 aaKnown RBP15.49■□□□□ 0.07
HDAC4-204ENST00000446876 R4GN57 208 aa15.49■□□□□ 0.07
HDAC4-204ENST00000446876 GRAP2O75791 330 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 PITX1P78337 314 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-204ENST00000446876 TRIP4Q15650 581 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-204ENST00000446876 SMYD5Q6GMV2 418 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 OR6B2Q6IFH4 312 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 TAC4Q86UU9 113 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 ETFBKMTQ8IXQ9 262 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 PHTF2Q8N3S3 785 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 SPEM1Q8N4L4 309 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 NOX5Q96PH1 765 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 IER2Q9BTL4 223 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 BBS2Q9BXC9 721 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 DCLK3Q9C098 648 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 HBS1LQ9Y450 684 aaKnown RBP15.48■□□□□ 0.07
HDAC4-204ENST00000446876 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
HDAC4-204ENST00000446876 K7EQS6 105 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 SART1O43290 800 aaKnown RBP15.47■□□□□ 0.07
HDAC4-204ENST00000446876 TULP3O75386 442 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 KAT7O95251 611 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 TDGF1P13385 188 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 TYRP14679 529 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 CHRNB2P17787 502 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-204ENST00000446876 STAT1P42224 750 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 CXCL12P48061 93 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 CCR3P51677 355 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 ARID5AQ03989 594 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 C2CD6Q53TS8 623 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 OLFML1Q6UWY5 402 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 SYNPOQ8N3V7 929 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 TMEM35BQ8NCS4 154 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 RPLP0P6Q8NHW5 317 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 IPO4Q8TEX9 1081 aaKnown RBP15.47■□□□□ 0.07
HDAC4-204ENST00000446876 EXOC4Q96A65 974 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 PNKPQ96T60 521 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 SYNCQ9H7C4 482 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 ARHGEF4Q9NR80 690 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 DNAJC17Q9NVM6 304 aaKnown RBP15.47■□□□□ 0.07
HDAC4-204ENST00000446876 MARK1Q9P0L2 795 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 FBXO4Q9UKT5 387 aa15.47■□□□□ 0.07
HDAC4-204ENST00000446876 A0A1B0GTH6 734 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 CAPN9O14815 690 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 TSPAN3O60637 253 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 SERPINC1P01008 464 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 IGLV3-27P01718 113 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 APODP05090 189 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 EIF2DP41214 584 aaKnown RBP15.46■□□□□ 0.07
HDAC4-204ENST00000446876 HARS2P49590 506 aaKnown RBP15.46■□□□□ 0.07
HDAC4-204ENST00000446876 TBX4P57082 545 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 YWHAZP63104 245 aaKnown RBP15.46■□□□□ 0.07
HDAC4-204ENST00000446876 NOMO3P69849 1222 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 FMO1Q01740 532 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 DMWDQ09019 674 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 FILIP1LQ4L180 1135 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 C2orf27AQ580R0 203 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 NAA35Q5VZE5 725 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 CPA5Q8WXQ8 436 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 FCRL2Q96LA5 508 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-204ENST00000446876 POPDC2Q9HBU9 364 aa15.46■□□□□ 0.07
HDAC4-204ENST00000446876 ZNF510Q9Y2H8 683 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms