RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 BEND5Q7L4P6 421 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 PKMYT1Q99640 499 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 ADAM33Q9BZ11 813 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 KLC2Q9H0B6 622 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 USP29Q9HBJ7 922 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 TMEM51Q9NW97 253 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 LGALS13Q9UHV8 139 aa16.27■□□□□ 0.2
SNX13-204ENST00000444712 E7ESA3 106 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 DNM1LO00429 736 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 MMP13P45452 471 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 SCAPQ12770 1279 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 NR1H3Q13133 447 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 MBTPS1Q14703 1052 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 LONRF1Q17RB8 773 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 PM20D1Q6GTS8 502 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 RTN4RL1Q86UN2 441 aaPredicted RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 ZBED8Q8IZ13 594 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 PWWP2AQ96N64 755 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 EPN3Q9H201 632 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 USP3Q9Y6I4 520 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 E7EVH7 732 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 NRP1O14786 923 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 SLCO1A2P46721 670 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 VEGFBP49765 207 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 CBLBQ13191 982 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 UBAP2Q5T6F2 1119 aaKnown RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 OTUD1Q5VV17 481 aaPredicted RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 SPATA2LQ8IUW3 424 aaPredicted RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 ATP11CQ8NB49 1132 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 SLC7A14Q8TBB6 771 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 HASPINQ8TF76 798 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 NDRG1Q92597 394 aaKnown RBP16.26■□□□□ 0.19
SNX13-204ENST00000444712 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.198e-7■■■■□ 22.8
SNX13-204ENST00000444712 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 LRRC4CQ9HCJ2 640 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 RAD54BQ9Y620 910 aa16.26■□□□□ 0.19
SNX13-204ENST00000444712 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 E7ENQ6 273 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 USP17L7P0C7H9 530 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 NCAM1P13591 858 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 BDNFP23560 247 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 YY1P25490 414 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 RBL1P28749 1068 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 CDK7P50613 346 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 NME3Q13232 169 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 CLLU1OSQ5K130 101 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
SNX13-204ENST00000444712 TDRPQ86YL5 185 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 COLGALT2Q8IYK4 626 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 DCP1BQ8IZD4 617 aaKnown RBP16.25■□□□□ 0.19
SNX13-204ENST00000444712 BCAS4Q8TDM0 211 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 PYROXD1Q8WU10 500 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 RNF139Q8WU17 664 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 LINC01599Q8WXQ3 324 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 APBB2Q92870 758 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 FETUBQ9UGM5 382 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 NAALADL1Q9UQQ1 740 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 MYO16Q9Y6X6 1858 aa16.25■□□□□ 0.19
SNX13-204ENST00000444712 EXOC1LA0A1B0GW35 172 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 GOT1P17174 413 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 KCNJ11Q14654 390 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 RASA2Q15283 850 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 HEATR6Q6AI08 1181 aaKnown RBP16.24■□□□□ 0.19
SNX13-204ENST00000444712 HFE2Q6ZVN8 426 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 GPRIN1Q7Z2K8 1008 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ABI1Q8IZP0 508 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 OR10T2Q8NGX3 314 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 VPS37BQ9H9H4 285 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 TBC1D13Q9NVG8 400 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ACTL7BQ9Y614 415 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 EEF2KO00418 725 aaKnown RBP16.24■□□□□ 0.19
SNX13-204ENST00000444712 SYN3O14994 580 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 HOXA2O43364 376 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 GCATO75600 419 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 SPAG6O75602 509 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 STK10O94804 968 aaKnown RBP16.24■□□□□ 0.19
SNX13-204ENST00000444712 FYNP06241 537 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ADRA1BP35368 520 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 MAGEA6P43360 314 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 HCAR3P49019 387 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ANKRD22Q5VYY1 191 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 FAM126BQ8IXS8 530 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 TFB1MQ8WVM0 346 aaKnown RBP16.24■□□□□ 0.19
SNX13-204ENST00000444712 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
SNX13-204ENST00000444712 SELENOSQ9BQE4 189 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 ARHGEF4Q9NR80 690 aa16.24■□□□□ 0.19
SNX13-204ENST00000444712 PIGVQ9NUD9 493 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms