RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MB21D2Q8IYB1 491 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPATA5Q8NB90 893 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 IL17RDQ8NFM7 739 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TMEM125Q96AQ2 219 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 FBXL20Q96IG2 436 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 UROC1Q96N76 676 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ACO2Q99798 780 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SMOQ99835 787 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 MYOCQ99972 504 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 FUCA2Q9BTY2 467 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NAA15Q9BXJ9 866 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NUP62CLQ9H1M0 184 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TNMDQ9H2S6 317 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 R3HDMLQ9H3Y0 253 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 KMT5AQ9NQR1 393 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 DDX19AQ9NUU7 478 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SIDT1Q9NXL6 827 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CFAP97Q9P2B7 532 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 RCOR1Q9UKL0 485 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NOL7Q9UMY1 257 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 POLHQ9Y253 713 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SALL1Q9NSC2 1324 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ROBO1Q9Y6N7 1651 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 RTL9Q8NET4 1388 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 COL16A1Q07092 1604 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SH2B2O14492 632 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CPLX1O14810 134 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CTAGE5O15320 804 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PROM1O43490 865 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF500O60304 480 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CTNND1O60716 968 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC43A1O75387 559 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 TCEA3O75764 348 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 AGFG2O95081 481 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ADCY5O95622 1261 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 NTSR2O95665 410 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CAVIN2O95810 425 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 TPM3P06753 285 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 MYBP10242 640 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 FCER1AP12319 257 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 FDPSP14324 419 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 TM4SF4P48230 202 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ALDH5A1P51649 535 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 POU6F2P78424 691 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 KIF23Q02241 960 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CHRNDQ07001 517 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SF3B3Q15393 1217 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZRSR2Q15696 482 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CAMK4Q16566 473 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC10A5Q5PT55 438 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 TEDDM1Q5T9Z0 273 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 KAZNQ674X7 775 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 XRRA1Q6P2D8 792 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CPLX2Q6PUV4 134 aaKnown RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SASS6Q6UVJ0 657 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SRGAP1Q7Z6B7 1085 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PDSS2Q86YH6 399 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 MIER2Q8N344 545 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 B3GALNT2Q8NCR0 500 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 OR2I1PQ8NGU4 316 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 BICD2Q8TD16 824 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PARD3BQ8TEW8 1205 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 DPF2Q92785 391 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 C8orf76Q96K31 380 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 NAP1L5Q96NT1 182 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 LRFN3Q9BTN0 628 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 NACAP1Q9BZK3 213 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 NAPBQ9H115 298 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CLSTN2Q9H4D0 955 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 WDR26Q9H7D7 661 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PPCSQ9HAB8 311 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 SEMA4GQ9NTN9 838 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 DACT1Q9NYF0 836 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PLCH1Q4KWH8 1693 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZMYM6O95789 1325 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 CARMIL3Q8ND23 1372 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 ATRNO75882 1429 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 PCSK5Q92824 1860 aa3.86□□□□□ -1.79
HMGB3P11-201ENST00000440127 LTBP4Q8N2S1 1624 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC69A6NI79 296 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 H3BML4 177 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 IFIT3O14879 490 aaKnown RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TRIAP1O43715 76 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 SH3BP5O60239 455 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TUSC2O75896 110 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 MBD4O95243 580 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 IGLV2-14P01704 120 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 GRIA3P42263 894 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 LIFRP42702 1097 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 TRAPPC10P48553 1259 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 METAP2P50579 478 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 RAPGEF1Q13905 1077 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 KRT72Q14CN4 511 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PTPRRQ15256 657 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 UAP1L1Q3KQV9 507 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 PLAC9Q5JTB6 97 aa3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 UTP14CQ5TAP6 766 aaKnown RBP3.85□□□□□ -1.79
HMGB3P11-201ENST00000440127 VWA1Q6PCB0 445 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms