RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 PEX11AO75192 247 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TRPA1O75762 1119 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 GABBR2O75899 941 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 PDHA1P08559 390 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 NEFHP12036 1026 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TFE3P19532 575 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 CALB2P22676 271 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TUBP50607 506 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 GDF10P55107 478 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 ADIGQ0VDE8 80 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 DARS2Q6PI48 645 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TOP6BLQ8N6T0 577 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 NDRG1Q92597 394 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 SENP8Q96LD8 212 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TMEM237Q96Q45 408 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 MYLK2Q9H1R3 596 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TRMT13Q9NUP7 481 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 TXLNGQ9NUQ3 528 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 RANBP2P49792 3224 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 H7C0C1 242 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 APOC4-APOC2K7ER74 178 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 POMCP01189 267 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 APOC2P02655 101 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 YY1P25490 414 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 ATP5DP30049 168 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 ATP5OP48047 213 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 ATXN1P54253 815 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 MTM1Q13496 603 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 MTFR1Q15390 333 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 BOLA3Q53S33 107 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 SLC30A9Q6PML9 568 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 PIGZQ86VD9 579 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 STK32AQ8WU08 396 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 UPF3AQ9H1J1 476 aaKnown RBP14.69□□□□□ -0.06
LIMD1-202ENST00000440097 LRRC4Q9HBW1 653 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 PCDH9Q9HC56 1237 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 CDH23Q9H251 3354 aa14.69□□□□□ -0.06
LIMD1-202ENST00000440097 PTPN1P18031 435 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 LRPAP1P30533 357 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 CAP1Q01518 475 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 CCDC15Q0P6D6 951 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 NOGQ13253 232 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 TFDP2Q14188 446 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 DPYSL3Q14195 570 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MAGEB18Q96M61 343 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 TSC22D3Q99576 134 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 SNRNP25Q9BV90 132 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 DHX35Q9H5Z1 703 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 CHST12Q9NRB3 414 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MIOSQ9NXC5 875 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 I3L4J1 428 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MAP3K13O43283 966 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 GM2AP17900 193 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 TARSP26639 723 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 ACADSBP45954 432 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 NRLP54845 237 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 BASP1P80723 227 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MXRA7P84157 204 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 VSIG1Q86XK7 387 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 CYP4X1Q8N118 509 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 SIX6OS1Q8N1H7 587 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 ZCCHC9Q8N567 271 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 GSTCDQ8NEC7 633 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 HASPINQ8TF76 798 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 PAAF1Q9BRP4 392 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 NINJ2Q9NZG7 142 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 TBK1Q9UHD2 729 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 SCN10AQ9Y5Y9 1956 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 SMIM24O75264 130 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 B3GAT3O94766 335 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 TPBGLP0DKB5 382 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 WARSP23381 471 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 FOXN2P32314 431 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MAGEA4P43358 317 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 RAB27AP51159 221 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 HDAC4P56524 1084 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 BCAR1P56945 870 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 MAP3K7CLP57077 242 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 ROR1Q01973 937 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 DCAF6Q58WW2 860 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 SYCP2LQ5T4T6 812 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 AGMOQ6ZNB7 445 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 UNC45BQ8IWX7 931 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 LMNTD2Q8IXW0 634 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 PCSK9Q8NBP7 692 aaKnown RBP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 KHSRPQ92945 711 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIMD1-202ENST00000440097 ERP27Q96DN0 273 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 PITPNM3Q9BZ71 974 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 LRMDAQ9H2I8 198 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
LIMD1-202ENST00000440097 NPR3P17342 541 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 TAC1P20366 129 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 ATP6V1C1P21283 382 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 RABGGTBP53611 331 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 ITGA7Q13683 1181 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms