RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TCRBV9S1A1TA0A576 114 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 GHRP10912 638 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 P4HA1P13674 534 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 AMPD1P23109 780 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 TARSP26639 723 aaKnown RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 MLH1P40692 756 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 LBX1P52954 281 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 HDAC4P56524 1084 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 ELF3P78545 371 aaPredicted RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 ROR1Q01973 937 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 TAP1Q03518 808 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 SEPT7Q16181 437 aaKnown RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 C9orf57Q5W0N0 161 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 DRICH1Q6PGQ1 229 aaPredicted RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 LCLAT1Q6UWP7 414 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 POLNQ7Z5Q5 900 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 KIRREL3Q8IZU9 778 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 CCDC185Q8N715 623 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 SLC2A14Q8TDB8 520 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 KLHL29Q96CT2 875 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 GAD1Q99259 594 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 LGMNQ99538 433 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 PAAF1Q9BRP4 392 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 CNPY3Q9BT09 278 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 AGO3Q9H9G7 860 aaKnown RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 USP29Q9HBJ7 922 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 SPC25Q9HBM1 224 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 ETNK1Q9HBU6 452 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 KLHL14Q9P2G3 628 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 HAO1Q9UJM8 370 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 ST3GAL5Q9UNP4 418 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 TET1Q8NFU7 2136 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 I3L4J1 428 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 CBX6O95503 412 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 METTL18O95568 372 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 KRT16P08779 473 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 RPSAP08865 295 aaKnown RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 SDC4P31431 198 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 THPOP40225 353 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 LHX8Q68G74 356 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 CES3Q6UWW8 571 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 CDHR3Q6ZTQ4 885 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 BEST2Q8NFU1 509 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 DENND1AQ8TEH3 1009 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 HASPINQ8TF76 798 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 TTC17Q96AE7 1141 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 ERP27Q96DN0 273 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 MECRQ9BV79 373 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 NSRP1Q9H0G5 558 aaKnown RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 CCDC134Q9H6E4 229 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 HMX1Q9NP08 348 aaPredicted RBP9.83□□□□□ -0.84
CUX1-206ENST00000437600 LGALS13Q9UHV8 139 aa9.83□□□□□ -0.84
CUX1-206ENST00000437600 A0A0G2JND7 137 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CYB561D2O14569 222 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CHUKO15111 745 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PYGBP11216 843 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ATICP31939 592 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 NME3Q13232 169 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 TRMT10BQ6PF06 316 aaKnown RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 OLFML1Q6UWY5 402 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SLC35F5Q8WV83 523 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 FAM111AQ96PZ2 611 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 RNF208Q9H0X6 261 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 RSAD1Q9HA92 442 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SEPT10Q9P0V9 454 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 HESX1Q9UBX0 185 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 GGA2Q9UJY4 613 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 FRMPD3Q5JV73 1810 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 REV3LO60673 3130 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 CASTOR2A6NHX0 329 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 EIF4E1BA6NMX2 242 aaKnown RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 CREB3O43889 395 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 TCEA3O75764 348 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CHRNA1P02708 482 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 GOT1P17174 413 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 GNL1P36915 607 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 ATN1P54259 1190 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 NCALDP61601 193 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 LACTB2Q53H82 288 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 PPP1R21Q6ZMI0 780 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 LRRC8CQ8TDW0 803 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ZNF75CPQ92670 426 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 KATNAL1Q9BW62 490 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 MYLK2Q9H1R3 596 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PCDH18Q9HCL0 1135 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 WDR35Q9P2L0 1181 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PSMC3IPQ9P2W1 217 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 GTF2IRD1Q9UHL9 959 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SHOC2Q9UQ13 582 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ARL2BPQ9Y2Y0 163 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PRUNE2Q8WUY3 3088 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 KPNA7A9QM74 516 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PTGESO14684 152 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 TYROBPO43914 113 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ZBED1O96006 694 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 KITP10721 976 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CD52P31358 61 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms