RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 GJB1P08034 283 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 MYL2P10916 166 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 CYP2F1P24903 491 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 ACADSBP45954 432 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 PTDSS1P48651 473 aaKnown RBP14.15□□□□□ -0.14
COL6A3-207ENST00000433762 MRPS5P82675 430 aaKnown RBP14.15□□□□□ -0.14
COL6A3-207ENST00000433762 ARHGAP1Q07960 439 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 ORC1Q13415 861 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 ZNF534Q76KX8 674 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 FBXO16Q8IX29 292 aaPredicted RBP14.15□□□□□ -0.14
COL6A3-207ENST00000433762 CTAGE3PQ8IX95 158 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 C1orf21Q9H246 121 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
COL6A3-207ENST00000433762 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 DNAJB4Q9UDY4 337 aa14.15□□□□□ -0.14
COL6A3-207ENST00000433762 SPDYE5A6NIY4 337 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 UNCXA6NJT0 531 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 TSPAN1O60635 241 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 LGALS2P05162 132 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 APRTP07741 180 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 L1CAMP32004 1257 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 HDAC4P56524 1084 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 DNAL1Q4LDG9 190 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 PMF1Q6P1K2 205 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 STRADAQ7RTN6 431 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 CDR2LQ86X02 465 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 CRLF3Q8IUI8 442 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 PPTC7Q8NI37 304 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 TRIM6Q9C030 488 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 RNPEPQ9H4A4 650 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 VTA1Q9NP79 307 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 TAS2R1Q9NYW7 299 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 STX18Q9P2W9 335 aaKnown RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 TRIP11Q15643 1979 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 A6NHS1 94 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 A6NJR5 290 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 BPGMP07738 259 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 PPIL2Q13356 520 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 NBPF20Q3BBV1 942 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 PPP1R26Q5T8A7 1209 aaPredicted RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 TTC30AQ86WT1 665 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 SMC1BQ8NDV3 1235 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 CCDC110Q8TBZ0 833 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 PIWIL1Q96J94 861 aaKnown RBP14.14□□□□□ -0.15
COL6A3-207ENST00000433762 THAP1Q9NVV9 213 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 HEY1Q9Y5J3 304 aa14.14□□□□□ -0.15
COL6A3-207ENST00000433762 SCN1AP35498 2009 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
COL6A3-207ENST00000433762 PAPSS1O43252 624 aaPredicted RBP14.13□□□□□ -0.15
COL6A3-207ENST00000433762 AVILO75366 819 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 PGK2P07205 417 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 BST1Q10588 318 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 LBRQ14739 615 aaKnown RBP14.13□□□□□ -0.15
COL6A3-207ENST00000433762 CDO1Q16878 200 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 INSCQ1MX18 579 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 CDHR3Q6ZTQ4 885 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 NUDCD3Q8IVD9 361 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 DNAJC9Q8WXX5 260 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 OLFM3Q96PB7 478 aa14.13□□□□□ -0.15
COL6A3-207ENST00000433762 ENTPD5O75356 428 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 CSDE1O75534 798 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 SERPINA6P08185 405 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 MYL4P12829 197 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 BCAT1P54687 386 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 NRLP54845 237 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 BST2Q10589 180 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 ZBTB6Q15916 424 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 C9orf131Q5VYM1 1079 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 FASTKD5Q7L8L6 764 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 TAB3Q8N5C8 712 aaPredicted RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 HSFY1Q96LI6 401 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 FERMT1Q9BQL6 677 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 C12orf65Q9H3J6 166 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 SMYD2Q9NRG4 433 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 AKT3Q9Y243 479 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 NVLO15381 856 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 DGKIO75912 1065 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 SLC34A1Q06495 639 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 FRG1Q14331 258 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 TRMT5Q32P41 509 aaKnown RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 MTHFD1LQ6UB35 978 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 NET1Q7Z628 596 aaPredicted RBP14.12□□□□□ -0.15
COL6A3-207ENST00000433762 ANKRD13AQ8IZ07 590 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 CRYBG2Q8N1P7 616 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 ANKRD52Q8NB46 1076 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 STKLD1Q8NE28 680 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 TTC8Q8TAM2 541 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 CDKL2Q92772 493 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 COPS5Q92905 334 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 ZNF333Q96JL9 665 aa14.12□□□□□ -0.15
COL6A3-207ENST00000433762 ARHGEF4Q9NR80 690 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms