RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 MPPED1O15442 326 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 CTIFO43310 598 aaKnown RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 HNRNPRO43390 633 aaKnown RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 PMPCBO75439 489 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 RHOP08100 348 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 SLC3A2P08195 630 aaKnown RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 IL6RP08887 468 aaPredicted RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 FAM90A15PP0C7V4 464 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 FAM90A14PP0C7W9 464 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TNNT1P13805 278 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 FOLR3P41439 243 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 AVPR1BP47901 424 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 SP2Q02086 613 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 MAP3K21Q5TCX8 1036 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TBC1D3GQ6DHY5 549 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 MSANTD2Q6P1R3 559 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 PIK3AP1Q6ZUJ8 805 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 WDR53Q7Z5U6 358 aaPredicted RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 ANKS1BQ7Z6G8 1248 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 GPR149Q86SP6 731 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.34
USP54-206ENST00000433394 METTL25Q8N6Q8 603 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 PROKR1Q8TCW9 393 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 HERVK_113Q902F9 699 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 PIGSQ96S52 555 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 ARHGEF3Q9NR81 526 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 TERF2IPQ9NYB0 399 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 AMFRQ9UKV5 643 aa6.71□□□□□ -1.34
USP54-206ENST00000433394 QSOX1O00391 747 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 ANP32CO43423 234 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 URI1O94763 535 aaPredicted RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 TTLL1O95922 423 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 HSP90AA1P07900 732 aaKnown RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 TNFAIP3P21580 790 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 HNRNPMP52272 730 aaKnown RBP eCLIP6.7□□□□□ -1.343e-6■■■■□ 21.2
USP54-206ENST00000433394 RBM6P78332 1123 aaKnown RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 CHRNDQ07001 517 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 GOLGA8FQ08AF8 430 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 KCNJ12Q14500 433 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 NAA35Q5VZE5 725 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 KAZNQ674X7 775 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 RNF207Q6ZRF8 634 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 PTCHD4Q6ZW05 846 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 PARS2Q7L3T8 475 aaKnown RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 ZNF551Q7Z340 670 aaPredicted RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 TMTC1Q8IUR5 882 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP54-206ENST00000433394 FAM71DQ8N9W8 422 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 ABHD11Q8NFV4 315 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 HDAC2Q92769 488 aaKnown RBP6.7□□□□□ -1.34
USP54-206ENST00000433394 LENG9Q96B70 501 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 GPR20Q99678 358 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 SMC4Q9NTJ3 1288 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 SWAP70Q9UH65 585 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 RAPGEFL1Q9UHV5 662 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 KCND3Q9UK17 655 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 ITIH6Q6UXX5 1313 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 ADGRA2Q96PE1 1338 aa6.7□□□□□ -1.34
USP54-206ENST00000433394 FER1L4A9Z1Z3 1794 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 PIPSLA2A3N6 862 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
USP54-206ENST00000433394 A6NLC8 198 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 DHHO43323 396 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 CBFA2T3O75081 653 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 NPSP0C0P6 89 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 NR2F6P10588 404 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 MATN1P21941 496 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 GRK5P34947 590 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 CTSWP56202 376 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 CCDC15Q0P6D6 951 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 GALNTL6Q49A17 601 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 AASDHQ4L235 1098 aaPredicted RBP6.69□□□□□ -1.34
USP54-206ENST00000433394 SPDYAQ5MJ70 313 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 PCGF5Q86SE9 256 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 PNPLA1Q8N8W4 532 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 HVCN1Q96D96 273 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 Q96MF0 132 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 TFCP2L1Q9NZI6 479 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 ANKFY1Q9P2R3 1169 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 LRIT1Q9P2V4 623 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 FBXO2Q9UK22 296 aaPredicted RBP6.69□□□□□ -1.34
USP54-206ENST00000433394 ARHGAP26Q9UNA1 814 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 ZBTB1Q9Y2K1 713 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 TSC22D4Q9Y3Q8 395 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 PCDHB7Q9Y5E2 793 aa6.69□□□□□ -1.34
USP54-206ENST00000433394 CENPVL1A0A0U1RR11 272 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 GXYLT2A0PJZ3 443 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 C3orf70A6NLC5 250 aaPredicted RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 SLC38A8A6NNN8 435 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TTC34A8MYJ7 566 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 EYA2O00167 538 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 AP4M1O00189 453 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 LPXNO60711 386 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 HKR1P10072 659 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 MYCLP12524 364 aaPredicted RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 JUPP14923 745 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms