RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 HLA-EP13747 358 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 GNA15P30679 374 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 AFF3P51826 1226 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SNRPD1P62314 119 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CCDC122Q5T0U0 273 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TRIM68Q6AZZ1 485 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 RAB42Q8N4Z0 105 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 OR2T3Q8NH03 318 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 NELFBQ8WX92 580 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 BSNDQ8WZ55 320 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM176AQ96HP8 235 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 UBE2TQ9NPD8 197 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TRPV5Q9NQA5 729 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 AGPAT3Q9NRZ7 376 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 THSD1Q9NS62 852 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TCF20Q9UGU0 1960 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MYO7AQ13402 2215 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 ZSWIM8A7E2V4 1837 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TTC26A0AVF1 554 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MEIS3P2A8K0S8 358 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 RHPN2P1A8MT19 583 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SLC16A3O15427 465 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MYBL2P10244 700 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 ARSAP15289 507 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SPIDRQ14159 915 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 ZSCAN23Q3MJ62 389 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 DNAJC24Q6P3W2 148 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 ZSCAN30Q86W11 494 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CBWD2Q8IUF1 395 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 DDIT4Q9NX09 232 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 RAB20Q9NX57 234 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 KCTD5Q9NXV2 234 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CACNG4Q9UBN1 327 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 GOLGA6L9A6NEM1 432 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 M0QZQ0 153 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SRGAP2O75044 1071 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CMA1P23946 247 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 STAT1P42224 750 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 POLR2LP62875 67 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 GRM3Q14832 879 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TRIP6Q15654 476 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SPDYCQ5MJ68 293 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TMEM173Q86WV6 379 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 GKN2Q86XP6 184 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MINDY1Q8N5J2 469 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 FAM174AQ8TBP5 190 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 BTN2A2Q8WVV5 523 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 KCNB2Q92953 911 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 LENG9Q96B70 501 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 UBXN6Q9BZV1 441 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 RBBP6Q7Z6E9 1792 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 NID2Q14112 1375 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 A0A1W2PQD8 194 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 BUB1O43683 1085 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PRPSAP2O60256 369 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 EPN2O95208 641 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 EGFP01133 1207 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SPATA31C1P0DKV0 1188 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CYP2A6P11509 494 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PPARGP37231 505 aaPredicted RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 RHOAP61586 193 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 EIF2B5Q13144 721 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SF3A2Q15428 464 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MAP9Q49MG5 647 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 DNTTIP2Q5QJE6 756 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ASCL5Q7RTU5 278 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TERB1Q8NA31 727 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 AVL9Q8NBF6 648 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 SNIP1Q8TAD8 396 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MAPK15Q8TD08 544 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TEKT4Q8WW24 435 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 USP28Q96RU2 1077 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CBWD1Q9BRT8 395 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 DNAJC28Q9NX36 388 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 NCOR1O75376 2440 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PLXNA1Q9UIW2 1896 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MYBPHLA2RUH7 354 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ABLIM3O94929 683 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 IGHA2P01877 340 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 STX17P56962 302 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TMEM119Q4V9L6 283 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 IER5LQ5T953 404 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CCHCR1Q8TD31 782 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CEP63Q96MT8 703 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 WDCPQ9H6R7 721 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 FANCEQ9HB96 536 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PLK2Q9NYY3 685 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 L1RE1Q9UN81 338 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 A0A1B0GUL6 1792 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ARHGAP42A6NI28 874 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 PTGESO14684 152 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 TRDMT1O14717 391 aaKnown RBP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 ALPIP09923 528 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CCDC130P13994 396 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 MAPK9P45984 424 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 RENBPP51606 427 aa4.77□□□□□ -1.65
UBE4A-202ENST00000431736 HNRNPKP61978 463 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBE4A-202ENST00000431736 CFAP221Q4G0U5 840 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms