RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 NCAM1P13591 858 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TM4SF1P30408 202 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TNNI2P48788 182 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TRPC1P48995 793 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TAS2R40P59535 323 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 OXA1LQ15070 435 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LPCAT4Q643R3 524 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 EEPD1Q7L9B9 569 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PPIL6Q8IXY8 311 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 ATP6V0D2Q8N8Y2 350 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TBC1D15Q8TC07 691 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PPP1R10Q96QC0 940 aaKnown RBP5.32□□□□□ -1.56
RIF1-203ENST00000428287 NACC1Q96RE7 527 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PSD2Q9BQI7 771 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 OSBPL11Q9BXB4 747 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 MROQ9BYG7 248 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 GRIP2Q9C0E4 1043 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 PFDN4Q9NQP4 134 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 CDC14AQ9UNH5 594 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 SUGT1Q9Y2Z0 365 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 TNCP24821 2201 aa5.32□□□□□ -1.56
RIF1-203ENST00000428287 LPXNO60711 386 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 NPM3O75607 178 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 ZNF189O75820 626 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 PSMD10O75832 226 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SRGAP2CP0DJJ0 459 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SRGAP2BP0DMP2 458 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 HIBADHP31937 336 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 ARRB2P32121 409 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CDH5P33151 784 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 DNAJC14Q6Y2X3 702 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 NEK10Q6ZWH5 1172 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 RCOR2Q8IZ40 523 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TSPAN14Q8NG11 270 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TFAP2CQ92754 450 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CCDC97Q96F63 343 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 DCUN1D1Q96GG9 259 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TMEM206Q9H813 350 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GTF2IRD1Q9UHL9 959 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ERGIC3Q9Y282 383 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PCDHA1Q9Y5I3 950 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SPTBN1Q01082 2364 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 LTBP4Q8N2S1 1624 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CYP26A1O43174 497 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TADA2AO75478 443 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CDH3P22223 829 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GLDCP23378 1020 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PDIA2Q13087 525 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 PHKG1Q16816 387 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 AOC3Q16853 763 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ARHGAP44Q17R89 818 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 INTS11Q5TA45 600 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 TMEM53Q6P2H8 277 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 MFSD7Q6UXD7 560 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 E2F7Q96AV8 911 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 MFSD14AQ96MC6 490 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TUT1Q9H6E5 874 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 DTNAQ9Y4J8 743 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 C3orf70A6NLC5 250 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 H3BSA7 217 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ADCY3O60266 1144 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SGPL1O95470 568 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 FAM58BPP0C7Q3 252 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 RPL7AP62424 266 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 Q3C1V9 767 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 KRT39Q6A163 491 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SEPT12Q8IYM1 358 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PTCD2Q8WV60 388 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 FEM1CQ96JP0 617 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SORT1Q99523 831 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 LBHD1Q9BQE6 289 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 CLSTN3Q9BQT9 956 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 OSBPL6Q9BZF3 934 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ZNF385DQ9H6B1 395 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 BCAS3Q9H6U6 928 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PRDM11Q9NQV5 511 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SARDHQ9UL12 918 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 hCG_1818297A0A087WSY0 165 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 RGS13O14921 159 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 FUCA1P04066 466 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 LLGL1Q15334 1064 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GRAMD1BQ3KR37 738 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 FAM117BQ6P1L5 589 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GDPD5Q8WTR4 605 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 BTBD6Q96KE9 485 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CCDC17Q96LX7 622 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 OLFM1Q99784 485 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CBWD1Q9BRT8 395 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TBC1D23Q9NUY8 699 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ARHGAP28Q9P2N2 729 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 IPO11Q9UI26 975 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 SPTA1P02549 2419 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 A0A1B0GTW7 788 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L5A8MUK1 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L15C9J2P7 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L13C9JLJ4 530 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms