RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 RPLP0P6Q8NHW5 317 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 CCDC26Q8TAB7 109 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 RNF139Q8WU17 664 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 ATRIPQ8WXE1 791 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 PLD4Q96BZ4 506 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 MIS12Q9H081 205 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 LHX5Q9H2C1 402 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 WDR35Q9P2L0 1181 aa18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 LIMA1Q9UHB6 759 aaKnown RBP18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 HBS1LQ9Y450 684 aaKnown RBP18.72■□□□□ 0.59
IGHV3-47-201ENST00000425060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 PES1O00541 588 aaKnown RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 TRIM24O15164 1050 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 PAPSS1O43252 624 aaPredicted RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 CACNG3O60359 315 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 LMNAP02545 664 aaKnown RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 APODP05090 189 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 TPGS1Q6ZTW0 290 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 SYT13Q7L8C5 426 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 SLC47A2Q86VL8 602 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 DENND1CQ8IV53 801 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 FAM217AQ8IXS0 508 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 LSM14BQ9BX40 385 aaKnown RBP18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 GANQ9H2C0 597 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 ARHGEF4Q9NR80 690 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 ST7Q9NRC1 585 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 FBXO10Q9UK96 956 aa18.71■□□□□ 0.59
IGHV3-47-201ENST00000425060 E5RJQ4 531 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 GFRA2O00451 464 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 CISD3P0C7P0 127 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 TYRP14679 529 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 CHKAP35790 457 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 TNFRSF4P43489 277 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 KIR2DL1P43626 348 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 FNTBP49356 437 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 COPB1P53618 953 aaKnown RBP18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 MRPS21P82921 87 aaKnown RBP18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 PDCLQ13371 301 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 RIF1Q5UIP0 2472 aaKnown RBP18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 CAVIN1Q6NZI2 390 aaKnown RBP18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 BEND5Q7L4P6 421 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 LONP2Q86WA8 852 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 CPXM2Q8N436 756 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 BBS2Q9BXC9 721 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 STK33Q9BYT3 514 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 EPC1Q9H2F5 836 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 TJP2Q9UDY2 1190 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 STOML2Q9UJZ1 356 aa18.7■□□□□ 0.58
IGHV3-47-201ENST00000425060 CCDC163A0A0D9SF12 145 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 NEDD8-MDP1E9PL57 170 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 SART1O43290 800 aaKnown RBP18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 MSI1O43347 362 aaKnown RBP18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 PENKP01210 267 aaPredicted RBP18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 IGLV3-27P01718 113 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 KLK7P49862 253 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 SEC13P55735 322 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 BPIFB4P59827 614 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 KDSRQ06136 332 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 RAPGEF1Q13905 1077 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 C2orf27AQ580R0 203 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 EMC10Q5UCC4 262 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 FYB2Q5VWT5 728 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 WDR5BQ86VZ2 330 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 CAMKK1Q8N5S9 505 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 TERB1Q8NA31 727 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 ACDQ96AP0 544 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 XPO6Q96QU8 1125 aaKnown RBP18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 CPXM1Q96SM3 734 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 BPIFA3Q9BQP9 254 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 FUCA2Q9BTY2 467 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 HCN2Q9UL51 889 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 SIK3Q9Y2K2 1263 aa18.69■□□□□ 0.58
IGHV3-47-201ENST00000425060 HRO43593 1189 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 CYP11B1P15538 503 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 DMC1Q14565 340 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 ANO6Q4KMQ2 910 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 IL17RCQ8NAC3 791 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 DDX1Q92499 740 aaKnown RBP18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 PIWIL1Q96J94 861 aaKnown RBP18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 PPP1R13BQ96KQ4 1090 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 DNAJC17Q9NVM6 304 aaKnown RBP18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 PLK2Q9NYY3 685 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 NAALADL1Q9UQQ1 740 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 STARD13Q9Y3M8 1113 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 GPR179Q6PRD1 2367 aa18.68■□□□□ 0.58
IGHV3-47-201ENST00000425060 FAM186AA6NE01 2351 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 TBC1D3BA6NDS4 549 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 LGALS16A8MUM7 142 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 F8VZ95 297 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 EPHB6O15197 1021 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 LATS1O95835 1130 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 NCAM1P13591 858 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 CDH5P33151 784 aaPredicted RBP18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 CNR2P34972 360 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 KRT9P35527 623 aa18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 HARS2P49590 506 aaKnown RBP18.67■□□□□ 0.58
IGHV3-47-201ENST00000425060 RING1Q06587 406 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms