RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CNPY3Q9BT09 278 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 TLR10Q9BXR5 811 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 PRKD2Q9BZL6 878 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 KCND1Q9NSA2 647 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 MOSPD3O75425 235 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 CD48P09326 243 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 NOS2P35228 1153 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 DEUP1Q05D60 604 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 PABPC1LQ4VXU2 614 aaKnown RBP14.01□□□□□ -0.17
PRPF39-202ENST00000424478 ZNF662Q6ZS27 426 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 RNF10Q8N5U6 811 aaKnown RBP14.01□□□□□ -0.17
PRPF39-202ENST00000424478 ALS2CR12Q96Q35 445 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 ABCC13Q9NSE7 274 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 CEBPBP17676 345 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 LTBRP36941 435 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 SLC25A52Q3SY17 297 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 PPP1R2P3Q6NXS1 205 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
PRPF39-202ENST00000424478 ADAT2Q7Z6V5 191 aaKnown RBP14.01□□□□□ -0.17
PRPF39-202ENST00000424478 ITIH5Q86UX2 942 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 TRIM58Q8NG06 486 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 RNF34Q969K3 372 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 MYRFLQ96LU7 910 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 HSFX1Q9UBD0 423 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 CCL26Q9Y258 94 aa14.01□□□□□ -0.17
PRPF39-202ENST00000424478 SLC12A8A0AV02 714 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 HABP4Q5JVS0 413 aaKnown RBP14□□□□□ -0.17
PRPF39-202ENST00000424478 DCAF12L1Q5VU92 463 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 CYP4V2Q6ZWL3 525 aaPredicted RBP14□□□□□ -0.17
PRPF39-202ENST00000424478 TXLNBQ8N3L3 684 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 IRGQQ8WZA9 623 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 RNF25Q96BH1 459 aaPredicted RBP14□□□□□ -0.17
PRPF39-202ENST00000424478 MS4A14Q96JA4 679 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 CAPZA3Q96KX2 299 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 GUCD1Q96NT3 240 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 GOLGA6L9A6NEM1 432 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 ZDHHC11BP0C7U3 371 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 SLFN11Q7Z7L1 901 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 COG1Q8WTW3 980 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 SLC46A2Q9BY10 475 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 MARCH2Q9P0N8 246 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 USP18Q9UMW8 372 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
PRPF39-202ENST00000424478 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 RNF8O76064 485 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 CKMP06732 381 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 PTPN2P17706 415 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 SLC25A11Q02978 314 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 GPR158Q5T848 1215 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 GET4Q7L5D6 327 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 EFHBQ8N7U6 833 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 RIN3Q8TB24 985 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 SIK2Q9H0K1 926 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 KCNK3O14649 394 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 SART1O43290 800 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 ZNF500O60304 480 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 HADHBP55084 474 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 ADAM15Q13444 863 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 PPP6R3Q5H9R7 873 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 HECTD3Q5T447 861 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 MEI1Q5TIA1 1274 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 SMYD5Q6GMV2 418 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 C11orf63Q6NUN7 778 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 CCDC33Q8N5R6 958 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 BHMTQ93088 406 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 PPP2R3CQ969Q6 453 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 TRMT2BQ96GJ1 504 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 HERPUD2Q9BSE4 406 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 ASNSD1Q9NWL6 643 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 FAM72CH0Y354 149 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 MBL2P11226 248 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 HDCP19113 662 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 CASQ1P31415 396 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 PIGHQ14442 188 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 FAM72AQ5TYM5 149 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 FAM72DQ6L9T8 149 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 FAM72BQ86X60 149 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 STAP1Q9ULZ2 295 aa13.99□□□□□ -0.17
PRPF39-202ENST00000424478 MRPS23Q9Y3D9 190 aaKnown RBP13.99□□□□□ -0.17
PRPF39-202ENST00000424478 DDX3YO15523 660 aaKnown RBP13.98□□□□□ -0.17
PRPF39-202ENST00000424478 XYLBO75191 536 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 RARAP10276 462 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 RALAP11233 206 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 TCEAL1Q15170 157 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 IFI16Q16666 785 aaKnown RBP13.98□□□□□ -0.17
PRPF39-202ENST00000424478 ANKRD54Q6NXT1 300 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 LRRN4Q8WUT4 740 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 CD101Q93033 1021 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 FAM118BQ9BPY3 351 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 HEMGNQ9BXL5 484 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 TKTL2Q9H0I9 626 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 ADAM7Q9H2U9 754 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms