RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 MED10Q9BTT4 135 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
CDCA3-202ENST00000422785 ETNK1Q9HBU6 452 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
CDCA3-202ENST00000422785 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-202ENST00000422785 H0YHG0 523 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 AVILO75366 819 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 CHRNA1P02708 482 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 KRT4P19013 534 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 CA4P22748 312 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 ARL4AP40617 200 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 LHX1P48742 406 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDCA3-202ENST00000422785 NCBP2-AS2Q69YL0 99 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 RGS9BPQ6ZS82 235 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 TRPM8Q7Z2W7 1104 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 SPATA21Q7Z572 469 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 SERINC5Q86VE9 423 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 PACS2Q86VP3 889 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 GRAMD1AQ96CP6 724 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 NPY6RQ99463 290 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
CDCA3-202ENST00000422785 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
CDCA3-202ENST00000422785 APRTP07741 180 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 FAM200BP0CF97 657 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 GOT1P17174 413 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 SCTRP47872 440 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 YWHAGP61981 247 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 MTFR1Q15390 333 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 OTUD1Q5VV17 481 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CAND1Q86VP6 1230 aaKnown RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 VPS52Q8N1B4 723 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PYROXD2Q8N2H3 581 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 AGGF1Q8N302 714 aaeCLIP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 WNT8BQ93098 351 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 SLC2A13Q96QE2 648 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PLCD4Q9BRC7 762 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 STAP1Q9ULZ2 295 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 GIT1Q9Y2X7 761 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 HACD1B0YJ81 288 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 ZWINTO95229 277 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PGK1P00558 417 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CTSHP09668 335 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 AMPD1P23109 780 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 NDUFV1P49821 464 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 ZKSCAN8Q15776 578 aaPredicted RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 FAM182AQ5T1J6 154 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 FAXCQ5TGI0 409 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 EP400NLQ6ZTU2 488 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 BZW1Q7L1Q6 419 aaKnown RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 RPAINQ86UA6 219 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CNPY4Q8N129 248 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 LRRC39Q96DD0 335 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 OLFM3Q96PB7 478 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 KRT82Q9NSB4 513 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PCNTO95613 3336 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 DGKIO75912 1065 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PIAS1O75925 651 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 FBXO21O94952 628 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 RPLP2P05387 115 aaKnown RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CLCNKBP51801 687 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 MAP3K7CLP57077 242 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PDK4Q16654 411 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 KBTBD12Q3ZCT8 623 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 SLC44A1Q8WWI5 657 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 ALKBH8Q96BT7 664 aaKnown RBP14.28□□□□□ -0.12
CDCA3-202ENST00000422785 SYT15Q9BQS2 421 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 MIOSQ9NXC5 875 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 PRKAG3Q9UGI9 489 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 ARL2BPQ9Y2Y0 163 aa14.28□□□□□ -0.12
CDCA3-202ENST00000422785 ARL5CA6NH57 179 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 GPR182O15218 404 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 METTL18O95568 372 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 GSTA1P08263 222 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 TPSB2P20231 275 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 RPL9P32969 192 aaKnown RBP14.27□□□□□ -0.12
CDCA3-202ENST00000422785 TKTL1P51854 596 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 NKX3-2P78367 333 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 MGAT3Q09327 533 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 SREBF2Q12772 1141 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 TPSAB1Q15661 275 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 SLC1A5Q15758 541 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.12
CDCA3-202ENST00000422785 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.12
CDCA3-202ENST00000422785 LPPQ93052 612 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 PITPNM3Q9BZ71 974 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 ARHGEF4Q9NR80 690 aa14.27□□□□□ -0.12
CDCA3-202ENST00000422785 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms