RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CASP2P42575 452 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RPL7AP62424 266 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 SYTL3Q4VX76 610 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 FASTKD1Q53R41 847 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 DAB2IPQ5VWQ8 1189 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 NAPEPLDQ6IQ20 393 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 ADCK2Q7Z695 626 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RASSF3Q86WH2 238 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 DDX42Q86XP3 938 aaKnown RBP eCLIP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 C3orf20Q8ND61 904 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 CFAP61Q8NHU2 1237 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 SMG7Q92540 1137 aaKnown RBP10.07□□□□□ -0.8
CMSS1-201ENST00000421999 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 NFKBIZQ9BYH8 718 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 CRLS1Q9UJA2 301 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
CMSS1-201ENST00000421999 PSMD3O43242 534 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 RAD51CO43502 376 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PHF2O75151 1096 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PCDH8O95206 1070 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SYF2O95926 243 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SMAD3P84022 425 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TMPRSS15P98073 1019 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SLC6A3Q01959 620 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ADCY2Q08462 1091 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PDK2Q15119 407 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PTRHD1Q6GMV3 140 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PSRC1Q6PGN9 363 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 C16orf59Q7L2K0 433 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TBC1D1Q86TI0 1168 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SERINC5Q86VE9 423 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 UBXN6Q9BZV1 441 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 NT5MQ9NPB1 228 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ADAM28Q9UKQ2 775 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CHMP2BQ9UQN3 213 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CILPO75339 1184 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 STBD1O95210 358 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TRUB2O95900 331 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PMS2P54278 862 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CSE1LP55060 971 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CREMQ03060 361 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 FUT10Q6P4F1 479 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 FBXO46Q6PJ61 603 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ANKRD52Q8NB46 1076 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 KRT35Q92764 455 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ZNF669Q96BR6 464 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 AGO3Q9H9G7 860 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 RBM22Q9NW64 420 aaKnown RBP eCLIP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CDK5RAP2Q96SN8 1893 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TRAV19A0A0A6YYK7 116 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 AP3B1O00203 1094 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 KPNA3O00505 521 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PPEF2O14830 753 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 PSTPIP1O43586 416 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ANXA9O76027 345 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 OTUD4Q01804 1114 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 MAMLD1Q13495 774 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 RCN2Q14257 317 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 C15orf59Q2T9L4 293 aaPredicted RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TFDP3Q5H9I0 405 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 NUGGCQ68CJ6 796 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 NT5DC3Q86UY8 548 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 MFN1Q8IWA4 741 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TMEM40Q8WWA1 233 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 CAPS2Q9BXY5 557 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ABCC13Q9NSE7 274 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 NVLO15381 856 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 RPL17P18621 184 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 JAM2P57087 298 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 OCRLQ01968 901 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 NNTQ13423 1086 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 IRF5Q13568 498 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 C11orf63Q6NUN7 778 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 ECHDC2Q86YB7 292 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 SPPL2BQ8TCT7 592 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 BCAS4Q8TDM0 211 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 HSFY1Q96LI6 401 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
CMSS1-201ENST00000421999 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 L2HGDHQ9H9P8 463 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 MLXIPLQ9NP71 852 aa10.06□□□□□ -0.8
CMSS1-201ENST00000421999 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms