RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ACSS3Q9H6R3 686 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 UGT1A7Q9HAW7 530 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 UGT1A10Q9HAW8 530 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 UGT1A8Q9HAW9 530 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 MIOSQ9NXC5 875 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 PHTF1Q9UMS5 762 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
DDX56-203ENST00000421223 KCNK1O00180 336 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 AP1G2O75843 785 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ENDOD1O94919 500 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 USP17L7P0C7H9 530 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 GHRP10912 638 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 PYGBP11216 843 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 YY1P25490 414 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 THPOP40225 353 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 GSCP56915 257 aaPredicted RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 YWHAZP63104 245 aaKnown RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 PURAQ00577 322 aaKnown RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 TRIM32Q13049 653 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 SLC26A9Q7LBE3 791 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 CRYBG2Q8N1P7 616 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 DEPDC1BQ8WUY9 529 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 RNF34Q969K3 372 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 FRMD8P1Q9BZ68 369 aaPredicted RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 IQCGQ9H095 443 aaKnown RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 NCAM1P13591 858 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 PNPLA4P41247 253 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 DEUP1Q05D60 604 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 NR1H3Q13133 447 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 EFHC2Q5JST6 749 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ARHGAP17Q68EM7 881 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 UNC5BQ8IZJ1 945 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 FAM111AQ96PZ2 611 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ULBP1Q9BZM6 244 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
DDX56-203ENST00000421223 EURLQ9NYK6 297 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 IL1RAPL1Q9NZN1 696 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 BAIAP2L1Q9UHR4 511 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 SLC24A2Q9UI40 661 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 ARL2BPQ9Y2Y0 163 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 TTLL3Q9Y4R7 772 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 SNX10Q9Y5X0 201 aa11.34□□□□□ -0.59
DDX56-203ENST00000421223 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 CXorf49A8MYA2 514 aaPredicted RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 TRIM49D1C9J1S8 452 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 NDC80O14777 642 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 NRP1O14786 923 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 LPXNO60711 386 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 B3GAT3O94766 335 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ASMTLO95671 621 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 THP07101 528 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 TGM2P21980 687 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 AXLP30530 894 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 CRHR2Q13324 411 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 OLIG2Q13516 323 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 KIAA0319Q5VV43 1072 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 GDF6Q6KF10 455 aaPredicted RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 CES3Q6UWW8 571 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 VSIG1Q86XK7 387 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 AGGF1Q8N302 714 aaeCLIP11.33□□□□□ -0.6
DDX56-203ENST00000421223 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 NPHS2Q9NP85 383 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 DTLQ9NZJ0 730 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 USP12O75317 370 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 FAM200BP0CF97 657 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 NPR3P17342 541 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 MATKP42679 507 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 NUMBP49757 651 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ITIH4Q14624 930 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 KCNJ11Q14654 390 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 PPP2R5DQ14738 602 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 MROH9Q5TGP6 573 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 TRMT10BQ6PF06 316 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 CEP57Q86XR8 500 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 CDKL3Q8IVW4 592 aaPredicted RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 FITM2Q8N6M3 262 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 SERAC1Q96JX3 654 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ZNF670Q9BS34 389 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 DUSP16Q9BY84 665 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 DNAI2Q9GZS0 605 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ECT2Q9H8V3 914 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 KLC4Q9NSK0 619 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 SLC17A6Q9P2U8 582 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 CCDC78A2IDD5 438 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 E7ENQ6 273 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 MFSD11O43934 449 aa11.33□□□□□ -0.6
DDX56-203ENST00000421223 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
DDX56-203ENST00000421223 AKR1A1P14550 325 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms